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Detailed information on CNT30293008


BLAST search results

BLAST vs Swiss-Prot:
sp|P23993|PSAL_HORVU, E-value = 3e-58

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3027985Triticum aestivumTheobroma cacao20.5517.8684.5497forward

Expression of CNT30293008

Peptides detected in this lncRNA

>peptide 1 (81 aa)
DSLKQPPSRRDHMICTHRTCMPIINLLEEVWEVEHVEEEVGPGGTGDTTEEEASGELRPPFSGLQLVGLLLAACERECGRG*

Sequence

>CNT30293008
TGGACTCTTTGAAGCAACCGCCATCGAGAAGAGATCACATGATCTGCACCCATCGTACATGCATGCCGATAATTAATCTACTTGAAGAAGTATGGGAGGT
CGAGCACGTAGAGGAGGAAGTAGGCCCAGGTGGCACCGGAGACACCACCGAAGAAGAAGCCTCCGGTGAACTGCGACCACCCTTCAGCGGTCTGCAGCTT
GTCGGCCTCCTTCTTGCGGCCTGTGAGCGTGAGTGCGGGCGCGGTTGACGGTGCGCCCTCGTTGAAGGACGCGACACCGTACATGGTGAGGCAGACGCTA
AGGATGGAGACGAGGCCGATGGCGCCGAGAGTGCCTGCCTGGCCGTGAATTGGCGTGTTGCGGAGCGGGCCGGTTGGAGAGGTACCAGGCGACGAGGGGG
CTGGAGGTGACGGGCGTCTCCAGGCTGCCGATGAATGGGTCGCCGTTGATGGGCTGGACCACCTGGTACGTC