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Detailed information on CNT30292923


BLAST search results

BLAST vs Swiss-Prot:
sp|P23993|PSAL_HORVU, E-value = 7e-44

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672548Triticum aestivumSetaria viridis89.9132.4492.68205forward
CNT30520857Triticum aestivumSetaria italica89.9121.7292.68205forward
CNT30639966Triticum aestivumNymphaea colorata66.2310.0684.11151forward
CNT30533956Triticum aestivumEucalyptus grandis67.9822.2183.87155forward
CNT30376200Triticum aestivumArabidopsis thaliana26.756.3286.8961forward
CNT3021623Triticum aestivumCitrullus lanatus42.987.2282.6598forward
CNT30629841Triticum aestivumVigna unguiculata84.6532.9984.46193forward
CNT30564216Triticum aestivumActinidia chinensis58.3359.6486.47133forward
CNT3084712Triticum aestivumVigna radiata60.9649.1284.89139forward
CNT30249690Triticum aestivumAvena sativa88.633.0695.54202forward
CNT30610860Triticum aestivumGossypium raimondii27.6321.3687.363forward
CNT30129085Triticum aestivumCorymbia citriodora67.9814.7284.52155forward
CNT30683149Triticum aestivumTriticum urartu90.3546.597.09206forward
CNT30597198Triticum aestivumOryza meridionalis42.547.2495.8897forward
CNT30359901Triticum aestivumLactuca sativa31.1410.4790.1471forward
CNT30319122Triticum aestivumAsparagus officinalis78.0712.0488.2178forward
CNT3037832Triticum aestivumCucumis melo51.3213.981.2117forward
CNT30582252Triticum aestivumEchinochloa crusgalli92.5432.0291.94211forward

Expression of CNT30292923

Peptides detected in this lncRNA

>peptide 1 (74 aa)
ERAGEREGDDEEVAVGEADFDAAEERADGGAVGGEVGEVPGDEGAGGDGRLQAADEWVAVDGLDHLVRRLFVEET

Sequence

>CNT30292923
GGAGCGGGCCGGTGAGCGCGAAGGGGACGACGAGGAGGTAGCCGTGGGCGAGGCCGACTTCGATGCCGCGGAGGAGCGGGCTGACGGCGGTGCGGTAGGC
GGGGAGGTTGGAGAGGTACCAGGCGACGAGGGGGCTGGAGGTGACGGGCGTCTCCAGGCTGCCGATGAATGGGTCGCCGTTGATGGGCTGGACCACCTGG
TACGTCGGCTGTTTGTAGAAGAGACAGG