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Detailed information on CNT30292897


BLAST search results

BLAST vs Swiss-Prot:
sp|P23993|PSAL_HORVU, E-value = 9e-99

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673014Triticum aestivumSetaria viridis55.0158.4888.27324forward
CNT30521214Triticum aestivumSetaria italica71.9957.6984.67424forward
CNT30698134Triticum aestivumQuercus lobata24.117.6280.28142forward
CNT30390478Triticum aestivumTriticum turgidum103.5751.1795.74610forward
CNT30438727Triticum aestivumAegilops tauschii38.5471.8495.15227forward
CNT30249726Triticum aestivumAvena sativa82.1760.3583.68484forward
CNT30662078Triticum aestivumTriticum dicoccoides32.666.2196.88192forward
CNT30454500Triticum aestivumSaccharum spontaneum33.7954.9787.44199forward
CNT30135064Triticum aestivumLolium perenne46.1847.6488.97272forward
CNT3014188Triticum aestivumZea mays55.6942.9386.59328forward
CNT30720963Triticum aestivumTriticum spelta94.91100.3697.32559forward
CNT30344813Triticum aestivumEragrostis tef45.6751.4388.1269forward
CNT30604850Triticum aestivumOryza punctata21.7313.1888.28128forward
CNT30556995Triticum aestivumPanicum hallii62.3152.285.83367forward
CNT30551896Triticum aestivumOryza brachyantha57.2250.8389.91337forward
CNT3040359Triticum aestivumMarchantia polymorpha21.917.2281.4129forward

Expression of CNT30292897

Peptides detected in this lncRNA

>peptide 1 (33 aa)
EECVNSFIHGLFEATAIEKRSHDLHPSYMHADN*

>peptide 2 (82 aa)
MDSLKQPPSRRDHMICTHRTCMPIINLLEEVWEVEHVEEEVGPGGTGDTTEEEASGELRPPFSGLQLVGLLLAACERECGRG*

Sequence

>CNT30292897
GTGAGGAATGTGTAAATTCATTTATACATGGACTCTTTGAAGCAACCGCCATCGAGAAGAGATCACATGATCTGCACCCATCGTACATGCATGCCGATAA
TTAATCTACTTGAAGAAGTATGGGAGGTCGAGCACGTAGAGGAGGAAGTAGGCCCAGGTGGCACCGGAGACACCACCGAAGAAGAAGCCTCCGGTGAACT
GCGACCACCCTTCAGCGGTCTGCAGCTTGTCGGCCTCCTTCTTGCGGCCTGTGAGCGTGAGTGCGGGCGCGGTTGACGGTGCGCCCTCGTTGAAGGACGC
GACACCGTACATGGTGAGGCAGACGCTAAGGATGGAGACGAGGCCGATGGCGCCGAGAGTGCCTGCCTGGCCGTGAATTGGCGTGTTGCGGAGCGGGCCG
GTGAGCGCGAAGGGGCCGACGAGGAGGTAGCCGTGGGCGAGGAGCGGGCTGACGGCGGTGCGGTAGGCGGGGAGGTTGGAGAGGTACCAGGCGACGAGGG
GGCTGGAGGTGACGGGCGTCTCCAGGCTGCCGATGAATGGGTCGCCGTTGATGGGCTGGACCACCTGGTACGTCGGCTGTTTGTAGAAG