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Detailed information on CNT30292836


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONOSAT000196, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30550626Triticum aestivumOryza brachyantha28.93103.0791.72302reverse complement

Expression of CNT30292836

Peptides detected in this lncRNA

>peptide 1 (43 aa)
PIIQFAPTIQAWFSSQSNFVTFVYPSDGSPFGGSLGTDSLYVD*

>peptide 2 (34 aa)
RSSNSLRRSRHGSVVKATSSLSCTHRTAALSGVP*

>peptide 3 (45 aa)
MSNEKSCEKHDRLPVEGFLHSVNLRRVNRSLRNPRKGYRPMGTRK*

>peptide 4 (50 aa)
MTTRRWAWKQPSFEESVIAHWSSSMAPKMSQGSSDSPKRRDLESSFFKCQ*

Sequence

>CNT30292836
CCGATCATCCAATTCGCTCCGACGATCCAGGCATGGTTCAGTAGTCAAAGCAACTTCGTCACTTTCGTGTACCCATCGGACGGCAGCCCTTTCGGGGGTT
CCTTAGGGACCGATTCACTCTACGTAGATTGACTGAACGCAGAAAGCCTTCCACTGGCAGGCGATCGTGTTTTTCACAGGATTTCTCGTTACTCATGTCA
GCATTCTCACTTCTGATATCTCCAGGTCTTGTCACCAAAAACCTTCCCCGATTGACAGAACGTCCCGCTACTGACACTTGAAAAAGCTGCTTTCAAGGTC
TCGTCGCTTCGGTGAATCACTTGAGCCCTGAGACATTTTCGGTGCCATGGAGCTAGACCAGTGAGCTATTACGCTTTCTTCAAAGGATGGCTGCTTCCAA
GCCCACCTCCTGGCCGTCATCCTTAGTACAGACAGACTGATTGGGTGCTAAGATCCAAAGTCGAGATGGAAACAGCCCAGATCGTACGCTAAGGTCCCTA
AGCAATCACTTAGTGGAAAAGGAAGTGATCGAGCGATGACAACCAGGAGGTGGGCTTGGAAGCAGCCATCCTTTGAAGAAAGCGTAATAGCTCACTGGTC
TAGCTCCATGGCACCGAAAATGTCTCAGGGCTCAAGTGATTCACCGAAGCGACGAGACCTTGAAAGCAGCTTTTTCAAGTGTCAGTAGCGAGACGTTCTG
TCAATCGGGGAAGGTTTTTGGTGACAAGACCTGGAGATATCAGAAGTGAGAATGCTGACATGAGTAACGAGAAATCCTGTGAAAAACACGATCGCCTGCC
AGTGGAAGGCTTTCTGCATTCAGTCAATCTACGCAGAGTCAATCGGTCCCTAAGGAACCCCCGAAAGGGCTACCGTCCGATGGGTACACGAAAGTGACGA
AGTTGCTTTGACTACTGAACCATGCCTGGATCGTCGGAGCGAATTGGATGATCGGGCCGAGGGCTGCCCCCTCTTCCCCTCGCTCTCCTTTCCTTAATAT
TCACCGTCGAGTCATCAAAGCCGTCAACTAATTCAGAGGGGCTC