« Back to Triticum aestivum search


Detailed information on CNT30292784


BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAI2|YCX91_PHAAO, E-value = 1e-12

BLAST vs NONCODE:
NONSLYT003133, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30157603Triticum aestivumPistacia vera24.8578.0990.47745forward
CNT30555751Triticum aestivumOryza glaberrima14.1459.4797.88424reverse complement
CNT30670388Triticum aestivumTriticum dicoccoides93.3399.7998.892798forward
CNT30140120Triticum aestivumLolium perenne100.2790.5198.443006forward
CNT3017956Triticum aestivumZea mays62.8153.3996.971883forward
CNT30595568Triticum aestivumOryza meridionalis12.8198.9798.7384reverse complement
CNT30108930Triticum aestivumOryza longistaminata58.1174.4498.281742forward
CNT30103741Triticum aestivumOryza rufipogon14.0480.0496.2421reverse complement

Expression of CNT30292784

Peptides detected in this lncRNA

>peptide 1 (84 aa)
MSAKAVALPYTRIHFLAGADTDFSLKAKKKKWANTRPSGRTCRLRLRAPADTFRSTFTCEPKSSCRTPSFLISVLAFFIFRRGL*

>peptide 2 (33 aa)
MMSMARGRALNGLGWPPFRFTNPRETPNTGRHP*

>peptide 3 (50 aa)
MTTRRWAWKQPSFEECVIAHWSSSMAPKMSQGSSDSPKRRDLESSFFKCQ*

>peptide 4 (71 aa)
KKTDALTRNGFRASCSIRCLLLFCLGKVRISYLIQGKEERWKVLLCQIEIVWVSAHVRRYRKSCIGWMPGH*

>peptide 5 (34 aa)
MGRDFSVIHGSPIGKPYPSSVASLRSLDFSNLAN*

>peptide 6 (45 aa)
MSSEKSCEKHDRLPVEGFLRSVNLRRVNRSLRNPRKGCRPMGTRK*

Sequence

>CNT30292784
CAAGAAAACGGATGCGCTAACGCGCAACGGCTTTCGCGCTAGTTGCTCAATCCGTTGCTTGCTTCTCTTCTGTCTTGGAAAAGTGAGGATTTCCTATCTG
ATCCAAGGGAAGGAAGAGAGGTGGAAAGTGTTGCTGTGTCAAATCGAGATTGTGTGGGTGTCCGCTCATGTTCGACGCTATCGAAAATCATGCATTGGAT
GGATGCCCGGGCATTGAGAAGGAAGGACGCTTTTAGAGGCGAAAGGCCATGGGGAGAGATTTTTCTGTGATCCATGGATCTCCGATCGGGAAACCGTATC
CAAGCTCCGTGGCTAGTCTGCGCTCTTTGGACTTTTCAAACTTAGCGAACTGAAACATCTGAGTAGCTAAAGGAAGGAAAATCAACCGAGACCCCGTTAG
TAGTGGCGAGCGAGAGCGGAACAAGGGTTTTCATCAAAAGAAATCCGAAGCGGTTTCATTCGATTTGTTGTGGATTGGATGATGGAAAAACCAGCAAGCA
GCAAGCGTAGTTAGAAAAGTTGCCGTAGCGCGCCCTACGGAGTTGTACAAAGTCAGCAACCGTTTTGGGGCGCAAGCATAGGCAACACAGGACTGATGAC
GGGGTGGGGCGCGCAGTGAACTGGTTTTCTAAAAAGATTGGAAGATCCGGCCAAAGAAGGTGATAGCCCTGTTCATTCGTTCCCATGGTTCGATCCTTCC
CAGTAAAACGCGGCGTGTTCGAATGATGATCGCTTTTACGCGAGAAAGGGGGACCACCCTCTAAGCCTAAGTATTCCTCAATGACCGATAGCGTACAAGT
ACCGTGAGGGAAAGGTGAAAAGAACCCCAATCGGGGAGTGCAATAGAGAACCTGAGATCCGATGCGAACAATCAGTCGAAGGAGTGGAGCGCGGGCGCAC
TCACTCTAACGGCGTACCTTTCGCATGATGGGTCAGCGAGGAAATGGGAACAGCGGCTTAAGCCATTAGGTGTAGGCGCTTTCCAGAGGTGGAAGATTTA
CGTTCTTCCTATTTGACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGAGGACCGAACCCACGTATGTGGCAAAA
TACGGGGATGACTTGTGGCTAGGGGTGAAAGGCCAACGAAGATCGGATATAGCTGGTTTTCCGCGAAATCTATTTCAGTAGAGCGTATGATGTCGATGGC
CCGAGGTAGAGCACTCAATGGGCTAGGGTGGCCCCCATTTCGCTTTACCAACCCCAGGGAAACTCCGAATACAGGCCGTCATCCTTAGTACAGACAGACT
GATTGGGTGCTAAGATCCAAAGTCGAGAGGGAAACAGCCCAGATCGTACACTAAGGTCCCTAAGCAATCACTTAGTGGAAAAGGAAGTGATCGAGCGATG
ACAACCAGGAGGTGGGCTTGGAAGCAGCCATCCTTTGAAGAATGCGTAATAGCTCACTGGTCTAGCTCCATGGCACCAAAAATGTCTCAGGGCTCAAGTG
ATTCACCGAAGCGACGAGACCTTGAAAGCAGCTTTTTCAAGTGTCAGTAGCGGGACGTTCTGTCAATCAGGGAAGGTTTTTGGTGACAAGACCTGGAGAT
ATCAGAAGTGAGAATGCTGACATGAGTAGCGAGAAATCCTGTGAAAAACACGATCGCCTGCCAGTGGAAGGCTTTCTGCGTTCAGTCAATCTACGCAGAG
TGAATCGGTCCCTAAGGAACCCCCGAAAGGGCTGCCGTCCGATGGGTACACGAAAGTGACGAAGTTGCTTTGACTACTGAACCATGCCTGGATCGTCGGA
GCGAATTGGATGATCGGGCCGAGGGCTGCCCCCTCTTCCCCTCGCTCTCCTTTCCTTAATATTCACCGTCGAGTCATCAAAGCCGTCAACTAATTCAGAG
GGGCTCGGCTGGCCCGGTCGCCCTACGCTACTGGCGCTTCCAAAGGCGAAGCTCTCGTCTTTGGCGACCAGCAAACGGAGGGCTAAAACCTGTAGTTTTG
AAGAAAGGGATGAGCGCGAAAGCCGTTGCGCTTCCGTACACGCGCATACATTTTCTTGCTGGGGCGGACACGGATTTCTCTCTAAAGGCGAAGAAAAAGA
AGTGGGCGAACACTCGGCCCAGCGGGCGAACATGCCGGCTCCGGCTCCGCGCACCTGCTGACACCTTTCGAAGCACTTTCACGTGTGAACCGAAGTCGTC
TTGCCGAACTCCTTCCTTTCTCATTTCAGTCCTCGCCTTTTTCATCTTCCGTAGGGGCCTTTAGTCTTTTGATTGGAGTGGAGGTCGCGAGAGAGCAGAG
CGTACCGCCCTGCCATAGTCGCGAGGATCTTAATAGTCGGTCGCGACTGTTGTCATAGTCAACGACGGTTGAAACTTCCAGGAAAAAACTTCGAATTGGG
AGGGCGATCCTCCCGGTGAACTGACCGTACCCCAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGCGCGTCGAGAGAACCATGTCGAAGGAACTCG
GCAAAATGACCCCATAACTTCGGGAGAAGGGGTGCTCTCCTATCTTTTGATTAGGAAAGCGGCACATACCAGGGGGTAGCGACTGTTTATTAAAAACACA
GGACTCTGCTAAGTGGTAACACGATGTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGTCGGAAGGAGAAGTGTGATAAGCTTTGAATGGAAGCCCTGG
TAAACGGCGGCAGTAACTCTAACTGTCCTAAGGTAGCGAAATTCCTTGTCGCATAAGTAGCGACCTGCACGAATGGTGTAAAGACTGCCCCGCTGTCTCC
GACATGGACCCGGTGAAATTGAATTCTCCGTGAAGATGCGGAGTACCAACGGCCAGACGGTAAGACCCCGTGCACCTTGACTATAGCTTCGCAGTGACAA
CCTTGATCGAATGTGTAGGATAGGTGGGAGGTGGTGACACACAACGACCAATCCTGAAAGACCACTCTTTCGTCTAAGGATGCCTAACCGCCGCACCG