Detailed information on CNT30292590


BLAST search results

BLAST vs Swiss-Prot:
sp|P23993|PSAL_HORVU, E-value = 3e-50

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30222490Triticum aestivumHordeum vulgare76.4946.3889.91218forward
CNT30555733Triticum aestivumOryza glaberrima33.336.6894.7495forward
CNT30344816Triticum aestivumEragrostis tef56.1437.6590.62160forward

Expression of CNT30292590

Peptides detected in this lncRNA

>peptide 1 (93 aa)
VGEADLDATDGDEADGAESACLAVNWRVAERAGEREGADEEVAVGEADFDAAEERADGGAVGDEGAGGDGRLQAADEWVAVDGLDHLVRRLFVE

Sequence

>CNT30292590
CCGTGGGCGAGGCTGACCTCGATGCCACGGATGGAGACGAGGCCGATGGCGCCGAGAGTGCCTGCCTGGCCGTGAATTGGCGTGTTGCGGAGCGGGCCGG
TGAGCGCGAAGGGGCCGACGAGGAGGTAGCCGTGGGCGAGGCCGACTTCGATGCCGCGGAGGAGCGGGCTGACGGCGGTGCGGTAGGCGACGAGGGGGCT
GGAGGTGACGGGCGTCTCCAGGCTGCCGATGAATGGGTCGCCGTTGATGGGCTGGACCACCTGGTACGTCGGCTGTTTGTAGAAG