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Detailed information on CNT30292308


BLAST search results

BLAST vs Swiss-Prot:
sp|Q43270|PLDA1_MAIZE, E-value = 1e-40

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30404571Triticum aestivumBeta vulgaris33.216.1783.9581forward
CNT30144288Triticum aestivumMedicago truncatula31.158.884.2176forward

Expression of CNT30292308

Peptides detected in this lncRNA

>peptide 1 (77 aa)
GSGCSWGSYSPSCFTSRLPRQKKVRYSLGFASIPFASRACVMSVYIISIVLLCQSRIACTDALSGTPSGLMPSGFQQ*

Sequence

>CNT30292308
CAGGTTCTGGTTGCTCCTGGGGTTCATATTCCCCATCCTGCTTCACCTCCCGGTTACCTAGGCAGAAGAAAGTGAGGTATTCCTTGGGGTTTGCTTCAAT
TCCCTTTGCCTCGAGAGCTTGTGTGATGTCAGTGTACATCATCTCCATTGTTCTCCTTTGCCAGTCCAGAATTGCTTGCACAGATGCACTCTCGGGAACA
CCCTCAGGCTTGATGCCTTCGGGCTTCCAGCAGTAGGAACTTCC