Detailed information on CNT30292052


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30679018Triticum aestivumTriticum urartu59.6196.5698.43701forward

Expression of CNT30292052

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MLLADLLLAIAACSDPRTVVRCAATCKTLRREIADASFIQPGLFQCIFAPGAM*

>peptide 2 (63 aa)
MPPFPSWTEQIRWKRWGPAGRAVGWVQRCFAGMPPEVVEAHIKTGGRCTLVRQRFKAQQQTYG*

>peptide 3 (71 aa)
MKTPMEKQHSRAAGVADATGGPPAGDRCMLRPKNRRPLRCHLQDPPPRNRGRLLYPTRAVPMYFCARGNVK*

>peptide 4 (30 aa)
MHTRQTEIQGTTTNLWMKKSRELLPCRRTP*

>peptide 5 (29 aa)
MDEEVAGAPSMPKNTVDARPRERAILYRS*

Sequence

>CNT30292052
GCTAGTACCATTATTCCACTGAGCTGAGCTTCGTGAGAGAGAGAGGATTCGAGAAAGTGAGGTCCGCCGTCCGGCGGTCCAGGCTCGTGGTCGTGGCCAG
CGACAGAGAGGGAGCAGCGGCTGCTGCCGGTGCTGCCGCTGCCTGACTCCGGCGCGCCCAAGCCCCGGCCGAGGCTGGAGTAGCTGCTCTGGCATGCCGC
CGTTCCCCTCCTGGACCGAGCAGATCCGTTGGAAAAGGTGGGGACCTGCAGGGCGTGCGGTCGGCTGGGTGCAGCGCTGCTTCGCGGGGATGCCGCCGGA
GGTCGTCGAGGCGCACATCAAGACGGGAGGCCGATGCACACTCGTCAGACAGAGATTCAAGGCACAACAACAAACCTATGGATGAAGAAGTCGCGGGAGC
TCCTTCCATGCCGAAGAACACCGTAGATGCTCGTCCACGTGAGAGGGCAATTCTCTATCGATCCTGATCTATTCTCGTCTCATCCACAATGGAGTAGATA
GATAGGAGAAAGGGTGTTGGAGATTTTGACGGCAGTCTGTTGATACGCGGGAGAAAGAAAGGCAGTTTTGCTGATTTTCTGTAATTAGAGATATACGATC
TGGTGGGTTGTTTGAGTGATGGGTCCACCAAGCCACGTGTTGGCCGCTGGTTGACCCTGCACGATAGTGCGTGCAGGGATCCCAGCAGGAGAGCCCGACC
CATTTAAAGATGTGTGGTTCCGTCTAAATAGGGCCGGCGCATCCACATCTTAACTAACTTGCAATCTTTTATTTCCATGAACTGAATAACAAATGTACTC
CATATATAGGGCCGGTGGATCGCTCGGCACGCTCCAAATCCACAGCGAAATGGCAACATGAAAACGCCAATGGAGAAACAACACTCGCGCGCCGCCGGCG
TCGCAGATGCTACTGGCGGACCTCCTGCTGGCGATCGCTGCATGCTCCGACCCAAGAACCGTCGTCCGCTGCGCTGCCACCTGCAAGACCCTCCGCCGCG
AAATCGCGGACGCCTCCTTTATCCAACCAGGGCTGTTCCAATGTATTTTTGCGCCCGGGGCAATGTAAAATAATTGTTTTTCATATTAAATTTTTATACT
TATTTTAAACTAAGTGTACCATATTACAATTGTAATTAATATTTTTTATTACTTAGTCACATAAAATGTTTTCAAA