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Detailed information on CNT30291829


BLAST search results

BLAST vs Swiss-Prot:
sp|P17933|RR2_WHEAT, E-value = 6e-157

BLAST vs NONCODE:
NONATHT002192, E-value = 2e-100

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696665Triticum aestivumOryza sativa32.1422.492.341267forward
CNT30678068Triticum aestivumSetaria viridis8.1920.3895.98323forward
CNT30317837Triticum aestivumCorylus avellana13.851.7184.74544forward
CNT30282912Triticum aestivumChenopodium quinoa13.850.7584.93544forward
CNT3021394Triticum aestivumCitrullus lanatus15.7398.8889.52620forward
CNT30198301Triticum aestivumPisum sativum13.3925.487.5528forward
CNT30505351Triticum aestivumNicotiana attenuata1921.5587.98749forward
CNT30226738Triticum aestivumHordeum vulgare8.6826.2399.12342forward
CNT3086153Triticum aestivumVigna radiata4.3176.9281.76170reverse complement
CNT30541450Triticum aestivumBrassica napus17.9125.1285.69706forward
CNT30238613Triticum aestivumBrassica oleracea7.5157.0381.42296forward
CNT30511101Triticum aestivumSolanum lycopersicum18.0958.3984.85713forward
CNT30172770Triticum aestivumTrifolium pratense10.8683.9284.81428forward
CNT30145240Triticum aestivumMedicago truncatula4.3130.5891.76170forward
CNT30440667Triticum aestivumAegilops tauschii7.153.7497.5280forward
CNT30660677Triticum aestivumTriticum dicoccoides19.3857.2799.08764forward
CNT30598585Triticum aestivumFraxinus excelsior13.1460.7386.1518forward
CNT3017990Triticum aestivumZea mays32.0638.292.561264forward
CNT30232563Triticum aestivumAnanas comosus22.425.7792.98883forward
CNT30205079Triticum aestivumHelianthus annuus13.8375.3884.77545forward
CNT30626489Triticum aestivumDaucus carota5.2823.7289.9208forward
CNT30687393Triticum aestivumTriticum urartu13.4410099.81530forward
CNT30621081Triticum aestivumCajanus cajan11.7744.4482.97464forward
CNT30596381Triticum aestivumOryza meridionalis2.4132.3184.2195forward
CNT30409854Triticum aestivumPapaver somniferum14.183.8684.89556forward
CNT3057337Triticum aestivumAmborella trichopoda19.0820.1883.24752forward
CNT30576494Triticum aestivumOryza barthii3.9820.2192.36157forward
CNT30604201Triticum aestivumOryza punctata2.5448.7886100reverse complement
CNT30726491Triticum aestivumLupinus angustifolius17.9160.686.83706forward

Expression of CNT30291829

Peptides detected in this lncRNA

>peptide 1 (59 aa)
MSTFTLCRNVRGHFRIPFLNTMTKMNSCFYHLFQINVPISSCHFFHTSFFLILPFHYGI*

>peptide 2 (47 aa)
MSGNLVIYLIPPRYLCKVDNFLFKIATSLFGRWWNFPIFSSALKSLN*

>peptide 3 (37 aa)
MLLNLLLFFWYQQLRNFFPYLLHQKLNHKLLIKNEPF*

>peptide 4 (57 aa)
MAGIGITKGTKETRTTTTNSSANIFPKSRKLSDNGFVKSSRMLIGKRIGVGLIYFSK*

>peptide 5 (62 aa)
MVPLRNSSEFRIVLKILCFRLSNKSFNTPFPKKIKTPTTTVRFIRFVAKISVLSPKLPADGQ*

>peptide 6 (36 aa)
MPILARIVRKCNSVFKQLFRVPRAPCTACWKTRCRT*

Sequence

>CNT30291829
AAAGTAGAAGTTCAAGGCCTAATTAATTTAATTATCTCTTCCATTCCAGGGACCCGAGAATGCCAATATTAGCACGAATCGTACGGAAATGTAACTCGGT
ATTCAAACAACTATTCAGAGTTCCTAGAGCTCCTTGTACGGCCTGTTGGAAAACCCGCTGTCGGACCTGATTCATTGCCCTTTGTTTTTCAAAATAAAGG
GTTTCGTTTTTAGACTTTTCCAATTGTTCCAAACTAATAGAAGTAGCATTAATCAAATTTGCTTTTTCTCGTTCTATCTCAGAGTATCCATTTATTCGAT
ACTCATCCGCTTCTAGTTCGACTTTCTGTAATCGAATCTGAGCTTTTTCGAGTTGCTCAATGGTCCCTCTACGCAATTCTTCTGAATTTCGAATAGTACT
CAAGATCCTCTGTTTTCGATTATCTAATAAATCTTTTAACACTCCCTTTCCAAAAAAAATCAAAACACCAACCACTACAGTTAGATTTATTCGATTTGTT
GCTAAAATATCGGTATTAAGCCCGAAACTGCCAGCGGATGGCCAGTGAGCTAAAAAAACGAAAGAATGGGTTACATTTTTCATATGCTCTCCTCTTATAG
ATAGGACGAACAAAGAACAAAGTTTTTCGATCACTTACTTCGCTCGCCCTTTTTTGATCGGTTTTTTTAATGCAAATAGATTCAATCTAGTAATTTCTTT
TAGATTAAGTCTTACGTCTTGTTTGACCGGTGAAAGACTTCCTTTGTTGAAATGTTCTGTTCCCAAAATTCCTAAAATAAAAGGAAAAAACTTTCCACTT
TCCTAAACTAAGGACGGGAAATAAGAAGGAGAGCATATCTTCTAAATTAATAATACTCAACTCAGCCCTTCCTAGAATGGGGTATTATCTGTCCCGATAA
ATAGATAATTCCAGGAGTAATAAATAGGAGTAAATTAAATAAAGTATTGATATAATTGGAATTGCGGAAGCAAATACCAATTTACTAAAAAAAGAAAAAA
GTATCTAATCGAAATCGAAAGAATTTTTTTTTAAGATTAAACAAAAGGGTTCGCAAATAAAAGCGCTAGTGCCACAACTAGTCCATAAATTGTTAAAGCT
TCCATAAAAGCTAGACTAAGCAATAAAGTACCTCGTATTTTACCTTCTGCTTCTGGCTGTCTCGCAATACCTTCTACAGCTTGTCCTGCAGCAGTACCTT
GACCAACTCCAGGTCCAATAGAAGCAATCCCTACGGCCAATCCAGCAGCAATAACAGAAGCAGCAGCAATTAGTGGATTCATGGTGAGTAGTTCCTCGTG
TCAAAAAAAAGAAATGGTTAAGGATACAATCAACCAATAAATTCTTACTTCTAAGCTCTATTGGGGAGAAGTAAAGTAACTAAAAAGTACAAATTGAAAT
CAAATTGAAATGATAATGTGAATTGTCCGAACTACATAGAAGGGAATTCCATATCCATATATCGGATTAGATAATGAATCTAACCTAGGAATATATAATA
TAATATCCTATATAAACATTTGTTTCTTCTATTTTGTTTGCATATTTTCTCATTTTCTATTGAATCGGATTCTAAAATCATTGCTTAAAGTGGAAACCCG
CATAAAAGAGGACTCCACTTATAGACATTAAGGATATTATAGTATAGATCTAGCCTGACTCCACCCTCCTTAATGCATATATACTTTGAAAATTCCATAA
TATAGTCTATTCTATTCTCTCTCCTACAACTCTAGGCTATATATTCATACGCATTTCTAACTATTTTTTTGCAACCAAGCAGATTATCCGGAACCATGCA
TGAATTGAGCTAAGCTGCAAAAAAAAAAAATACTATTTCCAAAAATAGTCAATTCAATGATGACCCTCCATGGATTCACCTATATAGGCTGCGGCTAATG
TTGCAAAAATAAGAGCTTGAATACCGCTTGTAAATAATCCAAGAAACATGGCCGGTATAGGGATTACTAAGGGGACTAAAGAAACAAGAACAACAACGAC
TAATTCATCCGCCAATATATTCCCGAAAAGTCGAAAGCTAAGTGATAATGGTTTTGTGAAATCTTCTAGGATGTTAATTGGTAAAAGGATTGGAGTTGGT
TTAATATATTTCTCGAAATAGCTCAATCCTTTTTTGCTAAGACCAGCATAAAAATATGCCGCTGACGTGAGTAAAGCTAAAGCAACAGTAGTATTTATAT
CATTCGTGGGCGCTGCTAATTCCCCATGGGGTAACTCTATAATTTTCCAAGGTAAAAGAGCACCCGACCAATTCGAAACAAAAATAAAAAGGAACATAGT
TCCAATAAAGGGAACCCAGGGACCATATTCTTCTCCAATCTGAGTTTTGCTCAAGTCTCGAATAAACTCAAGGACATATTCAAAAAAATTCTGACCGTCG
GTCGGGATGGTTTGTGGATTCCGAACAGCTATGACAACTGAACCTAGCAAGATAGTAATTACGACCCAAGAAGTGATGAGTACTTGGGCATGAATTTGGA
AACCTCCTATTTGCCAATAGAAGTGTTGGCCTACTTCTACACCCGATATATCGTATAACCCCTTGAGTGTTTTAATGGAACAAGGTATAATATTCATATT
GTCCTCTGATAGAAATTGAACTTCAAAAAAGGAATTCTTTTGATTCAACCATCTCTTTCTCAACTCAGCAACTTGAAGTATTAATCTTATATTTAGGATA
CCAAGAAAGCACATCAGATCATAATATATATCAATACCCTCTAATATATATCAATATTCCCCTTCTTTTTTCTATGCAAAAAAAATTCTATGCAAAAAAA
AAAGATATAGTAAAGTAAGTGATTCCATAAATTTACGCAGTTGCCCAAGAATTCACTATATATTCTTAATCAACGATTTCTTATATAGAGAGAACGGCCC
TCACAAATTGAAAATACTAATTTGTTAAGAATCAATCGAATTGAAGTCATAGTGTCATCGTTGGCTGGAATCGATATATTCGCGAGATCCGGGTCACAAA
TTGTATCGACTAAAGAAATAGTAGGAATCCCCAAAATGGCACATTCCCGAAGAGCTATATACTCTTTTTGCTGATCAAGGACGATCACAATGTCTGGCAA
TCTCGTCATATATTTGATCCCGCCGAGATACCTTTGCAAGGTAGATAATTTTCTCTTCAAGATTGCCACATCTCTTTTTGGGAGATGGTGGAATTTTCCC
ATTTTTTCTTCTGCTCTTAAGTCTCTAAATTGAGAAAGTCTAGTTTTCGTAATCGACCAATTCGTTAACATACCACTGAACCACTTTTTATTAACATAAT
GACAACGAGCCCTTATTGCAGCTGATGCTACTAAATCTGTTGCTCTTTTTTTGGTACCAACAATTAAGAAACTTTTTCCCTTACTTGCTGCATCAAAAAC
TAAATCACAAGCTTCTGATAAAAAACGAGCCGTTCTAGCGAGATTTATAATATGAGTACCTTTACGCTTTGCCGAAATGTAAGGGGCCATTTTAGGATTC
CATTTCTTAATACCATGACCAAAATGAACTCCTGCTTCTATCATCTCTTTCAAATTAATGTTCCAATATCTTCTTGTCATTTTTTCCACACTTCCTTTTT
TTTAATCCTACCATTCCATTACGGAATTTAGTTCTTTTTGAAGATTAAGAAAGATCCGAAATAGCTTGAAATAAATAATAATTGTTCCGAGAGAACCTTG
TACTAAGATAAGAGTTGGCCATTGATACATGGTATAAACATAACCACCTTAATGAATTAACTGACTTGTTTTACTTATTAAAATAAAAATCTTAAAAATC
TAAAATTTGACCTGTTAGTGTTCTAAGTTCAAAAGTCTAGTAAAGTAAAAAATATTTTTTATGTATCCTTAAATGATATAGGGTTAAATGTTAAATGGGG
GTTCTTATGTCTCATAAAAATTGTTTGTTACGTCAGAATCTG