Detailed information on CNT30291706


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30193719Triticum aestivumSecale cereale64.482.3488.36275forward
CNT30388731Triticum aestivumTriticum turgidum59.0272.2199.21252forward
CNT30660836Triticum aestivumTriticum dicoccoides58.7841.1599.2251forward
CNT30683064Triticum aestivumTriticum urartu73.7767.1698.1315forward

Expression of CNT30291706

Peptides detected in this lncRNA

>peptide 1 (39 aa)
HGRFYLGVGLHAWECTCSAHAGRCLHTYKDPRSGSVTWY*

>peptide 2 (44 aa)
MEALIGAAAAAASSAARHLRGCLGLDGGLDWCWLGASCVLLACWL

>peptide 3 (51 aa)
MHGSAPALLMLAGAYIHTKTLDQVALHGTRWMDGSIIDMMHARGACMIDDQ*

>peptide 4 (67 aa)
MINDLAAAAGAAAAGAALALGAAAASSAARHLRGCLGLDGGLDWRCRSRSFLRSKTSSRLLGIGWRP*

>peptide 5 (34 aa)
PREILFRGRFTCMGVHLLCSCWQVLTYIQRPSIR*

Sequence

>CNT30291706
CCACGGGAGATTTTATTTAGGGGTCGGTTTACATGCATGGGAGTGCACCTGCTCTGCTCATGCTGGCAGGTGCTTACATACATACAAAGACCCTCGATCA
GGTAGCGTTACATGGTACTAGATGGATGGATGGATCGATCATAGATATGATGCATGCGCGCGGTGCATGCATGATCGATGATCAATGATCTAGCAGCTGC
AGCAGGAGCAGCCGCAGCTGGTGCCGCACTTGCACTGGGCGCTGCCGCAGCTTCCTCCGCAGCAAGACATCTTCGAGGTTGCTTGGGATTGGATGGAGGC
CTTGATTGGCGCTGCCGCAGCCGCAGCTTCCTCCGCAGCAAGACATCTTCGAGGTTGCTTGGGATTGGATGGAGGCCTTGATTGGTGTTGGCTAGGAGCT
TCCTGTGTGCTTCTTGCTTGCTGGCTT