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Detailed information on CNT30291489


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30388298Triticum aestivumTriticum turgidum60.0944.29100256forward
CNT30660459Triticum aestivumTriticum dicoccoides60.0939.57100256forward
CNT30682902Triticum aestivumTriticum urartu40.6141100173forward
CNT30583094Triticum aestivumEchinochloa crusgalli10.0921.3993.0243forward

Expression of CNT30291489

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MDEMRLRFSVVGGGELLVGALADEADVVDEGHAGA*

>peptide 2 (55 aa)
MPEPEPAKTKMSMEMNSATPARKVSGWDSSPGAPMAILLTGIFDGHSFFFFWMDGS

Sequence

>CNT30291489
GGATGAGATTATTCCTGACTGACTGACTCGCACACACTGTTTACCCTGAATTTCTCAAGGACAAGATAGCGCAATGAAACTAAACTGGCTTACTGATGAT
GACGCGACGACGTACACTTGCTGGAATTTTTGAAGCGATTTCAATCTCTCATGGCGATGACGGATGGACGAGATGAGATTGAGGTTTTCAGTAGTCGGCG
GTGGGGAGCTGCTCGTGGGGGCGCTGGCCGATGAAGCAGATGTCGTAGACGAGGGCCATGCCGGAGCCTGAGCCGGCGAAGACGAAGATGAGCATGGAGA
TGAACTCGGCGACGCCGGCGCGGAAGGTGTCCGGGTGGGACAGCTCCCCCGGGGCGCCGATGGCGATCCTGCTCACCGGCATTTTCGACGGGCACTCTTT
CTTTTTTTTCTGGATGGATGGATCGG