Detailed information on CNT30291456


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30709610Triticum aestivumGlycine max25.625.5890.3262forward
CNT30389136Triticum aestivumTriticum turgidum72.7387.5698.86176forward
CNT30133874Triticum aestivumLolium perenne54.1317.4286.26131forward
CNT304540Triticum aestivumZea mays25.216.2488.5261forward
CNT30148832Triticum aestivumBrachypodium distachyon35.1216.5487.0685forward

Expression of CNT30291456

Peptides detected in this lncRNA

>peptide 1 (79 aa)
RLVGGGGGDEEGGAGGLDLGVHGGAGGLDLGVHVAAAAAVAALAGAAAAAASSAARHLRGCLGLDGGLDWCWLGASCVLL

>peptide 2 (72 aa)
ALWVAVAATRRVAPAASTSGYMVAPAASTSGYMLQPPQPLPHLQALPQPQLPPQQDIFEVAWDWMEALIGVG*

>peptide 3 (67 aa)
PCGWRWRRRGGWRRRPRPRGTWWRRRPRPRGTCCSRRSRCRTCRRCRSRSFLRSKTSSRLLGIGWRP*

Sequence

>CNT30291456
CGCCTTGTGGGTGGCGGTGGCGGCGACGAGGAGGGTGGCGCCGGCGGCCTCGACCTCGGGGTACATGGTGGCGCCGGCGGCCTCGACCTCGGGGTACATG
TTGCAGCCGCCGCAGCCGTTGCCGCACTTGCAGGCGCTGCCGCAGCCGCAGCTTCCTCCGCAGCAAGACATCTTCGAGGTTGCTTGGGATTGGATGGAGG
CCTTGATTGGTGTTGGCTAGGAGCTTCCTGTGTGCTTCTTGC