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Detailed information on CNT30291343


BLAST search results

BLAST vs Swiss-Prot:
sp|P12112|ATPA_WHEAT, E-value = 0.0

BLAST vs NONCODE:
NONORUT007280, E-value = 2e-147

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30703171Triticum aestivumQuercus lobata81.9110.3484.981232forward
CNT30553137Triticum aestivumOryza glaberrima16.29102.0888.98245reverse complement
CNT30680889Triticum aestivumTriticum urartu24.4751.1898.64368reverse complement
CNT30340274Triticum aestivumEragrostis tef19.88101.786.96299reverse complement
CNT3057982Triticum aestivumAmborella trichopoda31.1226.9686.54468forward
CNT30121210Triticum aestivumCitrus clementina82.4531.8485.321240forward
CNT30575833Triticum aestivumOryza barthii33.0574.1891.95497forward
CNT30604314Triticum aestivumOryza punctata9.1851.1197.1138forward

Expression of CNT30291343

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MESSYYLSYGGCSLTDSYINTYYTFPFLIENCSCGYCCFASLSVPNN*

Sequence

>CNT30291343
AAATAAAAGAAAGAATAAAATATGAAAGAAAAGCGTCCATTGTCTAATGGATAGGACAGAGGTCTTCTAAACCTTTGGTATAGGTTCAAATCCTATTGGA
CGCAATCTTATTTCTATCTATTCTTTAAATAACTATACTAAACTAAAAACAAAGAAAACTTTTTTGCATGATTCAAATGAAAAATCTTTCTCAACGATTC
CTATTCTACTAACAAGAGTAGACATGCAAAATTTATTTGTTACTAAAGAGAAAACCATTCCAGCTGTTCCTGAATAGCTTCCTTCAAAAGGATTTCCGCT
TGCTCGGTGAATGTCTTGCTAGAAGATATAATTTCTTGGAATTGAGGTTTAGTATCTTTTAGATGTTTACGTAACTCATCCAGAAATTTATTTACCTATT
CAATTTCTAACGAATCAAGATATCCTCTTGTTCCGGTATAAATAGTAGCTATCTGCTCTTCCACTGGGAGAGGATTTGCCTGGGATTGTTTAAGCAATTC
CCTTAATCATCGACCCCTTGCCAATTGATTCTGACTTGTTTTATCGAGAGCAGAGGCGAATTGTGCAAAGGCTTGTAACTCTGCGAATTGAGCTAGTTCC
AATTTTGATTTGCCAGCTACTTGTTTCATGGCTTTAATTTGAGCCGCGGATCCTACTCTGGAAACAGAAATACCCACATTAATAGCGGGTCGAATTCCGG
CATTGAATAGATCCGCAGATAAGAATATTTGTCCATCTGTAATGGAGATTACATTAGTAGGAATATAGGCGGAAACGTCTCCAGATTGAGTCTCAACTAT
TGGTAAAGCGGTCATACTTCCTTTGCCTAAAAGAGAATTTAATTTAGCGGCTCTTTCTAAAAGGCGTGAATGCAAATAAAAAACATCCCCTGGATAAGCC
TCACGGCCGGGAGGTCTTCTTAATAGAAGGGACATTTGGCGATAAGCTTGTGCCTGTTTGGAGAGATCATCATAAATTATTAAAGTATGCCATTCGCGGT
ACATAAAATACTCAGCCAGGGCTGCTCCCGTATAAGGCGCGAGGTATTGTAATGTAGCAGGTGAATCCGCCATCTCAGCTACTACAATAGTGTATTCCAT
GGCCCCCTCCTCATGGAAAGTAGTTACTACTTGAGCTACGGAGGATGCTCTTTGACCGATAGCTACATAAACACATATTACACCTTCCCCTTTTTGATTG
AGAATTGTAGCTGTGGCTACTGCTGTTTTGCCAGTCTGTCTGTCCCCAATAATTAACTCTCGCTGACCGCGCCCTATAGGGATCATCGAATCGATAGCAA
TAAGCCCTGTTTGAAGAGGTTCGTATACGGAACGCCTGGAAATTATACTTGGAGCAGGAGATTCAATTAAGCGAGATTCGGAAGCTATAATTTCGCCTTT
CCCATCAATAGGTTTAGCCAGAGCATTTACAACACGACCCAAGTAAGCCTCACTCACGGGTATCTGAGCAATTCTTCCTGTTGCTTTTACAAAACTTCCC
TCTT