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Detailed information on CNT30291271


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30222985Triticum aestivumHordeum vulgare88.9568.889.13322forward
CNT30389287Triticum aestivumTriticum turgidum73.4849.8198.5266forward
CNT30438202Triticum aestivumAegilops tauschii85.0848.595.13308forward

Expression of CNT30291271

Peptides detected in this lncRNA

>peptide 1 (56 aa)
MTDDLAAAAGAAAAGAALALGAAAAAASSAARHLRGCLGLDGGLDWCWLLLCFLLAG

>peptide 2 (41 aa)
HKHMYRGLNHGRFYLGVYMHGMAPALLMQAGAYIHTKTVIR*

Sequence

>CNT30291271
AACACAAACACATGTATAGGGGGTTAAACCACGGGAGATTTTATTTAGGGGTTTACATGCATGGCATGGCACCTGCTCTGCTCATGCAGGCAGGTGCGTA
CATACATACAAAGACCGTGATCAGGTAGCGTTACATGGTGGTAGATGGATATATAGATAGATCATAGATATGAGGCACGCGGTGCATGCATGACCGATGA
TCTAGCAGCTGCAGCAGGAGCAGCCGCAGCTGGTGCCGCACTTGCACTGGGCGCTGCCGCAGCCGCAGCTTCCTCCGCAGCAAGACATCTTCGAGGTTGC
TTGGGATTGGATGGAGGCCTTGATTGGTGTTGGCTTCTTTTGTGCTTCTTGCTTGCTGGCTT