« Back to Triticum aestivum search


Detailed information on CNT30291213


BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAI2|YCX91_PHAAO, E-value = 9e-56

BLAST vs NONCODE:
NONZMAT001339, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696475Triticum aestivumOryza sativa51.2469.5398.991780forward
CNT30677010Triticum aestivumSetaria viridis24.591.5193.54851forward
CNT30524664Triticum aestivumSetaria italica26.6867.7198.49927forward
CNT30639555Triticum aestivumNymphaea colorata42.285.8395.231466forward
CNT30536068Triticum aestivumEucalyptus grandis45.0545.4492.911565reverse complement
CNT30513456Triticum aestivumJuglans regia45.1149.37941567forward
CNT30500477Triticum aestivumCoffea canephora43.4782.9294.111510forward
CNT30269781Triticum aestivumChenopodium quinoa44.9952.8992.771563forward
CNT30730500Triticum aestivumCorchorus capsularis33.2297.2294.631154forward
CNT30630109Triticum aestivumVigna unguiculata45.4250.0693.281578forward
CNT30196858Triticum aestivumPisum sativum44.1382.5592.431533forward
CNT30503447Triticum aestivumNicotiana attenuata32.8468.295.181141reverse complement
CNT3044711Triticum aestivumPrunus dulcis13.99101.8994.03486reverse complement
CNT30638683Triticum aestivumCapsicum annuum14.7199.0390.61511reverse complement
CNT3090649Triticum aestivumSolanum tuberosum45.0257.2194.761564forward
CNT30186247Triticum aestivumSecale cereale40.4198.7399.641404forward
CNT30225309Triticum aestivumHordeum vulgare30.4587.895.461058forward
CNT30400299Triticum aestivumTriticum turgidum40.8266.4899.651418forward
CNT30588765Triticum aestivumMusa acuminata17.4786.9695.39607reverse complement
CNT30511396Triticum aestivumSolanum lycopersicum17.767.2190.57615forward
CNT30552690Triticum aestivumOryza glaberrima10.5924.0497.28368forward
CNT30444225Triticum aestivumAegilops tauschii31.7810099.281104forward
CNT30248027Triticum aestivumAvena sativa27.9899.7997.43972reverse complement
CNT30668159Triticum aestivumTriticum dicoccoides20.5510096.08714forward
CNT30310298Triticum aestivumCamelina sativa29.4267.0295.31022reverse complement
CNT3062651Triticum aestivumArabidopsis lyrata19.8382.8195.79689reverse complement
CNT30460907Triticum aestivumSaccharum spontaneum66.3269.1599.182304forward
CNT30136065Triticum aestivumLolium perenne18.57100.4798.14645forward
CNT3018333Triticum aestivumZea mays62.7576.3699.272180forward
CNT3067405Triticum aestivumLeersia perrieri11.9210094.44414forward
CNT30655263Triticum aestivumRosa chinensis43.9884.6591.491528forward
CNT30206724Triticum aestivumHelianthus annuus42.6368.2595.481481forward
CNT30713553Triticum aestivumMalus domestica golden14.9777.1593.65520forward
CNT30689042Triticum aestivumTriticum urartu63.1376.0999.042193forward
CNT30720907Triticum aestivumTriticum spelta29.3910099.511021reverse complement
CNT30596725Triticum aestivumOryza meridionalis58.8159.299.312043forward
CNT30154922Triticum aestivumPrunus persica44.9992.5491.111563reverse complement
CNT30410430Triticum aestivumPapaver somniferum41.8850.2994.091455reverse complement
CNT30646402Triticum aestivumCannabis sativa31.6186.889.441098reverse complement
CNT30319706Triticum aestivumAsparagus officinalis44.9954.3895.841563forward
CNT30332807Triticum aestivumDioscorea rotundata40.6785.5395.91413reverse complement
CNT30148090Triticum aestivumBrachypodium distachyon43.9852.699.481528reverse complement
CNT30103033Triticum aestivumOryza rufipogon44.599.6897.871546reverse complement
CNT30576679Triticum aestivumOryza barthii10.6270.2997.83369forward
CNT30585638Triticum aestivumEchinochloa crusgalli22.6350.7899.24786reverse complement
CNT30604668Triticum aestivumOryza punctata12.4198.1896.75431forward

Expression of CNT30291213

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MGESLTEQCRVEVEGLWVVNFFSRRRNNDGI*

>peptide 2 (29 aa)
MGHVESRVNQQGPPWKAKYSWVTDSEVVP*

>peptide 3 (32 aa)
MSKCIGRGAFRLRGKQPRKRGSTKRKRECRLE*

>peptide 4 (38 aa)
MSRRLIGSGLVKGTEPTGAVAKASLNRAIVTAYGPEPG*

>peptide 5 (36 aa)
MISSWSERLISHTGTETRPRLLREAAVGNFPQWAKA*

>peptide 6 (48 aa)
MGDKLHRREGNSPDHQLRPLNDRSVIKEVGVQRQPGGLPRSSHPLKSA*

>peptide 7 (40 aa)
MQALSGMIGRKASVGGFSSPPSNPRAQPWTGGGNYQAGVR*

>peptide 8 (55 aa)
MDTRHPETRKGVASDEMLRGVENKHRSGDSQIGQPFKLPAESMSRQETTWRTETS*

>peptide 9 (49 aa)
MSVKMRTTCTWTERPYEALLFPGIGFGPFLRSLGGRRRRPPSGGGPSHQ*

>peptide 10 (35 aa)
MPRAEVRVPSAAALKYEPRGLAIASPRGSYQALRC*

>peptide 11 (59 aa)
MPLEPRASWFSPKCVEAQQLTGHLGVKHCFGAGCASGTKSRQTLNTRYDPKITGVKVGQ*

>peptide 12 (68 aa)
MNGAKRSAEAVGCQNASVGERSALEGSNRESGGRRSGSENVGLSNENIGENPMPRKPKVSSARFVHGG*

Sequence

>CNT30291213
GCGAACGGGAATGGATAAGAGGCTTGTGGGATTGACGTGATAGGGTAGGGTTGGCTATACTGCTGGTGGCGAACTCCAGGCTAATAATCTGAAGCGCATG
GATACAAGTTATCCTTGGAAGGAAAGACAATTCCGAATCTGCTTTGTCTACGAATAAGGAAGCTATAAGTAATGCAACTATGAATCTCATGGAGAGTTCG
ATCCTGGCTCAGGATGAACGCTGGCGGCATGCTTAACACATGCAAGTCGAACGGGAAGTGGTGTTTCCAGTGGCGAACGGGTGAGTAACGCGTAAGAACC
TGCCCTTGGGAGGGGAACAACAACTGGAAACGGTTGCTAATACCCCGTAGGCTGAGGAGCAAAAGGAGAAATCTGCCCAAGGAGGGGCTCGCGTCTGATT
AGCTAGTTGGTGAGGTAATAGCTTACCAAGGCGATGATCAGTAGCTGGTCCGAGAGGTTGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTAC
GGGAGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGTGGAAGGCCTATGGGTCGTCAACTTCTTTTCTCGG
AGAAGAAACAATGACGGTATCTGAGGAATAAGCATCGACTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCGGAATGATAGGG
CGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCCGTCAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGC
AGAGGGAATTTCCGGTGGAGCGGTGAAATGCATTGAGATCGGAAAGAACACCAACGGCGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAA
GCTAGGGGAGCAAATGGGATTAGAGACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCACCCAGAGACGAGGAAGGGCGTAGCAAGCGACGAAAT
GCTTCGGGGAGTTGAAAATAAGCATAGATCCGGAGATTCCCAAATAGGTCAACCTTTTAAACTGCCTGCTGAATCCATGAGCAGGCAAGAGACAACCTGG
CGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAGCCTAAACCGTGAAAACGGGGT
TGTGGGAGAGCAATACAAGCGTTGTGCTGCTAGGCGAAGCGGTTGAGTGCCGCACCCTAGATGGCTAAAGTCCAGTAGCCGAAAGCATCACTAGCTTACG
CTCTGACCCGAGTAGCATGGGGCACGTGGAATCCCGTGTGAATCAGCAAGGACCACCTTGGAAGGCTAAATACTCCTGGGTGACCGATAGCGAAGTAGTA
CCGTGAGGGAAAGGTGAAAAGAACCCCCAGTGGGTAGTGAAATAGAACGTGAAACCGTGCTGAGCTCCCAAGCAGTGGGAGGGGAAAGTGATCTCTGACC
GCGTGCCTGTTGAAGAATGAGCCGGCGACTCATAGGCAGTGGCTTGGTTAAGGGAACGGAACCCACCGGAGCCGTAGCGAAAGCGAGTCTTAATAGGGCG
ATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGATGAAACTAAGCAGAGGTCCGAACCGACTGATGTTGAAGA
ATCAGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCCCCGAAATGCGTTGAGGCGCAGCAGTTGACTGGACATC
TAGGGGTAAAGCACTGTTTCGGTGCGGGCTGCGCGAGCGGTACCAAATCGAGGCAAACTCTGAATACTAGATATGACCCAAAAATAACAGGGGTCAAGGT
CGGCCAGTGAGACGATGGGGGATAAGCTTCATCGTCGAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATAAAGGAGGT
GGGGGTGCAAAGACAGCCAGGAGGTTTGCCAAGAAGCAGCCACCCTTTAAAGAGTGCGTAATAGCTCACTGATCGAGCGCCCTTGCGCTGAAGATGAACG
GGGCTAAGCGATCTGCCGAAGCTGTGGGATGTCAAAATGCATCGGTAGGGGAGCGTTCCGCCTTAGAGGGAAGCAACCGCGAAAGCGGGGGTCGACGAAG
CGGAAGCGAGAATGTCGGCTTGAGTAACGAAAACATTGGTGAGAATCCAATGCCCCGAAAACCCAAGGTTTCCTCCGCAAGGTTCGTCCACGGAGGGTGA
GTCAGGGCCTAAGATCAGGCCGAAAGGCGTAGTCGATGGACAACAGGTCAATATTCCTGTACTACCCCTTGTTGGTACGGAGGGACGGAGGAGGCTAGGT
TAGCCGAAAGATGGTTATAGGTTTAAGGACACAAGGTGACCCTGCTTTTTCAGGGTAAGAAGGGGTAGAGAAAATGCCTCGAGCCGAGGTCCGAGTACCA
AGCGCTGCAGCGCTGAAGTATGAGCCCCGTGGACTAGCGATTGCTTCTCCACGAGGCTCATACCAGGCGCTACGGTGCTGAAGTATGTAACTGATGCCAT
ACTCCCAGGAAAAGCTCGAACGACCTTCAACAAAAGGGTACCTGTACCCGAAACCGACACAGGTGGGTAGGTAGAGAATACCTAGGGGCGCGAGACAACT
CTCTCTAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCCCCTCACAAAAGGGGGCCGCAGTGACCAGGCCCGGGCGACTGTTTACC
AAAAACACAGGTCTCCGCAAAGTCGTAAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAAGGAAGTTGGTGAACTGATGACAGGGAAG
CCGGCGACCGAAGCCCCGGTGAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCCGCACGAACGGCGTAA
CGATCTGGGCACTGTCTTGGAGAGAGGCTCGGTGAAATAGACATGTCTGTGAAGATGCGGACTACCTGCACCTGGACAGAAAGACCCTATGAAGCTTTAC
TGTTCCCTGGGATTGGCTTTGGGCCTTTCCTGCGCAGCTTAGGTGGAAGGCGAAGAAGGCCCCCTTCCGGGGGGGGCCCGAGCCATCAGTGAGATACCAC
TCTGGAAGAGCTCGGATTCTAACCTTGTGTCAGACCTGCGGGCCAAGGGACAGTCTCAGGTTCAGAACGTCGTGAGACAGTTCGGTCCATATCCGGTGTG
GGCGTTAGAGCATTGAGAGGACCTTTCCCTAGTACGAGAGGACCGGGAAGGACGCACCTCTGGTGTACCAGTTATCGTGCCTACGGTAAACGCTGGGTAG
CCAAGTGCGGAGAGGATAACTGCTGAAAGCATATAAGTAGTAAGCCCACCCCAAGATGAGTGCTCTCTCCTCCG