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Detailed information on CNT30290805


BLAST search results

BLAST vs Swiss-Prot:
sp|P11383|RBL_WHEAT, E-value = 0.0

BLAST vs NONCODE:
NONMEST005601, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3019929Triticum aestivumCitrullus lanatus13.756.2288.93244forward
CNT30565170Triticum aestivumActinidia chinensis58.8491.7788.361048forward
CNT30682029Triticum aestivumTriticum urartu48.0181.0499.53855forward
CNT30434475Triticum aestivumPapaver somniferum17.2479.9588.6307forward
CNT30121217Triticum aestivumCitrus clementina46.692.5386.87830forward

Expression of CNT30290805

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MDKLHNRSIGCLPQQQARCDSIVLCNDQDW*

Sequence

>CNT30290805
TGAGCCGAGTTTAATTGCAATCAATTAGAAGAATAAAGAAGAATTACTGCATTTCATAACTTATTTTTTTCTCTTTTTATTTCGTTTCTTTTTTATTTAT
ACCTTCTTTATCTTTAGTTTTATCTAGTTAATCAATAGTATCTACCGGCTCGAACTCGAATTTGATCGCCTTCCATACTTCACAAGCTGCGGCTAGTTCA
GGACTCCATTTGCAAGCTGCTCGGATAATTTCATTACCTTCGCGAGCAAGATCGCGCCCTTCGTTACGAGCTTGTACACAGGCTTCTAAAGCCACTCGAT
TAGCTGCTGCACCAGGTGCATTTCCCCAAGGATGTCCTAAAGTTCCTCCACCAAATTGTAATACAGAATCGTCCCCAAAGATTTCGGTCAGAGCTGGCAT
ATGCCAAACATGAATACCACCTGAAGCTACCGATTTCGGTCAGAGCTGGCATATGCCAAACATGAATACCACCTGAAGCTACCGGTATAACACCTGGCAT
GGATACCCAGTCCTGAGTGAAAAAGATACCGCGAGCACGATCTTTTTCAATAAAATCATCGCGCAATAAATCAACAAAACCTAAAGTCATTTCGCGTTCC
CCTTCTAACTTACCTACTACTGTACCGGAGTGGATATGATCTCCCCCAGACATACGCAATGCTTTAGCTAATACACGGAAATGCATACCATGATTTTTCT
GTCTATCAATAACTGCATGCATTGCACGGTGAATGTGAAGAAGTAGGCCATTGTCGCGGCAATAATGAGCCAAAGTAGTATTTGCGGTGAATCCCCCAGT
TAAGTAGTCATGCATTACAATAGGAACCCCTAATTCTCTTGCAAATACAGCTCTCTTAATCATTTCTTCACATGTACCCGCAGTCGCTTTCAAGTAATGC
CCCTTGATTTCACCGGTTTCGGCCTGTGATTTATAAATAGCTTCGGCACAAAAGACAAAACGGTCTCTCCAGCGCATAAATGGTTGTGAGTTTACGTTTT
CATCATCTTTGGTAAAATCAAGTCCACCACGTAGACACTCATAACACGCTCTACCATAATTTTTTGCGGATAATCCCAATTTTGGTTTAATAGTACATCC
CAATAAAGGACGACCATACTTGTTCAACTTATCTCTTTCAACTTGGATACCATGAGGCGGGCCTTGGAAAGTTTTTGAATAAGTAGGGGGAATTCGTAGA
TCCTCCAAACGTAGAGCACGTAGGGCTTTGAAACCAAATACGTTACCTACAATGGAAGTAAACATGTTAGTAACGGAACCCTCTTCAAATAGGTCTAATG
GATAAGCTACATAACAGATCCATTGGCTGTCTTCCCCAGCAACAGGCTCGATGTGATAGCATCGTCCTTTGTAACGATCAAGACTGGTAAGTCCATCAGT
CCAAACAGTTTTCCATGTACCAGTAGAAGATTCGGCAGCTACTGCAGCCCCTGCTTCTTCGGGCGGAACCCCAGGCTGAGGACTTACTCGGAATGCTGCC
AAGATATCAGTATCCTTAGTTTCATACTCTGGGGTGTAGTAAGTCAATTTATAATCTTTAACACCAGCTTTAAATCCAACACCTGCTTTAGTTTCTGTTT
GTGGTGACATAAGTCCCTCCCTATAACTCTTGAATTAAGAATTCTCACAATAACAGGGTCTACTCGATGTTAATTAGGCGTAAATGAAACTTTAGCAAAA
ATCTCGTAAAACAAAAAGGATATTCAATTAATATAATATCAACTCATTAAAGAAAATTGAGGGCATGCTTAGGTTAATGAA