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Detailed information on CNT30290662


BLAST search results

BLAST vs Swiss-Prot:
sp|P26667|RBS2_WHEAT, E-value = 5e-75

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30385453Triticum aestivumTriticum turgidum10037.4698.38678forward

Expression of CNT30290662

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MHAPQPMFVQTQIIPKEKYALVGKQSPGQK*

>peptide 2 (44 aa)
MLHNLCSYKHRSYRRKNMLWSGSRVLDKSEVHKRQSYIGHCFNS*

Sequence

>CNT30290662
GCTTGTTGTATATAATAAATATCACACTGGTGTTGTATATGTGTAGCCGGTGCTAGAATTTACATATGCATGCTCCACAACCTATGTTCGTACAAACACA
GATCATACCGAAGGAAAAATATGCTCTGGTCGGGAAGCAGAGTCCTGGACAAAAGTGAAGTTCACAAAAGACAATCATACATAGGCCATTGTTTTAACTC
GTAGTTTAGGCCTTGCCAGACTCCTCGCAACCCGGTGGCCTGAATGCGATGAAGCTGACGCACTGCACCTGGCGCAGGTTGTCGAAGCCGATGACGCGGA
CATAGGCGTCAGGGTACTCCTTCTTGACCTCCTCCACCTCGTTGAGCACCTGCGTGGCGTCGGTTGTCGAAGCCGATGACGCGGACATAGGCGTCAGGGT
ACTCCTTCTTGACCTCCTCCACCTCGTTGAGCACCTGTGTGGCGTCGGTGCACCCGAACATAGGCAGCTTCCACATTGTCCAGTATCGACCATCGTAGTA
CCCGGGGGAGCTGTTGTGCTCACGGAAAACGAAGCCAACCTTGCTGAACTCGAGGCAGGGCACCCACTTGGAGCGGATCAAGTAGTCGACCTGCTTCAGG
AGGGCCTCCGTGGAGAGGGGTGGCAAGTAAGACAGGGTCTCGAACTTCTTGATGCCCTCAATTGGCCACACCTGAATG