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Detailed information on CNT30290424


BLAST search results

BLAST vs Swiss-Prot:
sp|P11383|RBL_WHEAT, E-value = 0.0

BLAST vs NONCODE:
NONMEST005601, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690840Triticum aestivumOryza sativa92.433295.61478forward
CNT30629265Triticum aestivumVigna unguiculata27.0238.1688.89432forward
CNT30201083Triticum aestivumPisum sativum78.1758.5586.241250forward
CNT30181907Triticum aestivumSecale cereale92.6292.199.261481forward
CNT30541452Triticum aestivumBrassica napus89.4985.8486.861431forward
CNT30239038Triticum aestivumBrassica oleracea40.2851.6486.96644forward
CNT30146680Triticum aestivumMedicago truncatula32.441.3486.87518forward
CNT3060115Triticum aestivumArabidopsis lyrata68.2346.0187.081091forward
CNT30622174Triticum aestivumCajanus cajan24.1453.0287.31386forward
CNT30355674Triticum aestivumLactuca sativa37.0980.3588.36593forward
CNT30480921Triticum aestivumChara braunii13.8829.2182.88222forward

Expression of CNT30290424

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MDKLHNRSIGCLPQQQARCDSIVLCNDQDW*

Sequence

>CNT30290424
CAATCAATTAGAAGAATAAAGAAGAATTACTGCATTTCATAACTTATTTTTTTCTCTTTTTATTTCGTTTCTTTTTTATTTATACCTTCTTTATCTTTAG
TTTTATCTAGTTAATCAATAGTATCTACCGGCTCGAACTCGAATTTGATCGCCTTCCATACTTCACAAGCTGCGGCTAGTTCAGGACTCCATTTGCAAGC
TGCTCGGATAATTTCATTACCTTCGCGAGCAAGATCGCGCCCTTCGTTACGAGCTTGTACACAGGCTTCTAAAGCCACTCGATTAGCTGCTGCACCAGGT
GCATTTCCCCAAGGATGTCCTAAAGTTCCTCCACCAAATTGTAATACAGAATCGTCCCCAAAGATTTCGGTCAGAGCTGGCATATGCCAAACATGAATAC
CACCTGAAGCTACCGGTATAACACCTGGCATGGATACCCATCCTGAGTGAAAAAGATACCGCGAGCACGATCTTTTTCAATAAAATCATCGCGCAATAAA
TCAACAAAACCTAAAGTCATTTCGCGTTCCCCTTCTAACTTACCTACTACTGTACCGGAGTGGATATGATCTCCCCCAGACATACGCAATGCTTTAGCTA
ATACACGGAAATGCATACCATGATTTTTCTGTCTATCAATAACTGCATGCATTGCACGGTGAATGTGAAGAAGTAGGCCATTGTCGCGGCAATAATGAGC
CAAAGTAGTATTTGCGGTGAATCCCCCAGTTAAGTAGTCATGCATTACAATAGGAACCCCTAATTCTCTTGCAAATACAGCTCTCTTAATCATTTCTTCA
CATGTACCCGCAGTCGCTTTCAAGTAATGCCCCTTGATTTCACCGGTTTCGGCCTGTGATTTATAAATAGCTTCGGCACAAAAGACAAAACGGTCTCTCC
AGCGCATAAATGGTTGTGAGTTTACGTTTTCATCATCTTTGGTAAAATCAAGTCCACCACGTAGACACTCATAACACGCTCTACCATAATTTTTTGCGGA
TAATCCCAATTTTGGTTTAATAGTACATCCCAATAAAGGACGACCATACTTGTTCAACTTATCTCTTTCAACTTGGATACCATGAGGCGGGCCTTGGAAA
GTTTTTGAATAAGTAGGGGGAATTCGTAGATCCTCCAAACGTAGAGCACGTAGGGCTTTGAAACCAAATACGTTACCTACAATGGAAGTAAACATGTTAG
TAACGGAACCCTCTTCAAATAGGTCTAATGGATAAGCTACATAACAGATCCATTGGCTGTCTTCCCCAGCAACAGGCTCGATGTGATAGCATCGTCCTTT
GTAACGATCAAGACTGGTAAGTCCATCAGTCCAAACAGTTTTCCATGTACCAGTAGAAGATTCGGCAGCTACTGCAGCCCCTGCTTCTTCGGGCGGAACC
CCAGGCTGAGGACTTACTCGGAATGCTGCCAAGATATCAGTATCCTTAGTTTCATACTCTGGGGTGTAGTAAGTCAATTTATAATCTTTAACACCAGCTT
TAAATCCAACACCTGCTTTAGTTTCTGTTTGTGGTGACATAAGTCCCTCCCTATAACTCTTGAATTAAGAATTCTCACAATAACAGGGTCTACTCGATG