« Back to Triticum aestivum search


Detailed information on CNT30290161


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30387005Triticum aestivumTriticum turgidum56.9314.6595.88534reverse complement
CNT30658926Triticum aestivumTriticum dicoccoides78.0459.2294.95732forward

Expression of CNT30290161

Peptides detected in this lncRNA

>peptide 1 (84 aa)
MYMCPSSEKDPQHIQILQMTVLYQTTATFDCHVKSSSSRIITSFQTCSASSSYSLRSELLIQEMNVSRCILVVDTSIFIHFCDK*

>peptide 2 (57 aa)
MQMLGPRRNSKQARNSHVGNHLKRALVHTALIEILTSFEPRTENEICKTNITENQKE*

>peptide 3 (32 aa)
MAWILCQLPSVENTFIQRKVLAELLFLPTNKL*

>peptide 4 (37 aa)
PVEWHGYCANSQVLKTPLYNERYWQNCYSCLQTNCRV*

Sequence

>CNT30290161
TCCCTGTTGAATGGCATGGATACTGTGCCAACTCCCAAGTGTTGAAAACACCTTTATACAACGAAAGGTATTGGCAGAACTGCTATTCTTGCCTACAAAC
AAATTGTAGGGTTTAGCAAAGCCAGATTAGAACTCTTGACACATATAAACACTGCTAATCGAATCCAAGCTGACCAAAATGCCTTACAGTGGTGCACCTG
ATGAAACTAGTCTGTGAGCATCAAACTGAACTGCAATCTACTTGACTCTTGAAGCTTATTTGAGGTGAACCTAAGATTCTGCTGTCTGCAGCACCATTTG
TTTTACATTCAAATGGGCCATCAGATCAACTACAGAACTAAACATTAAAGCTCAACTAGAATGGTATCAACCAACACGAGTATATTTCTCACTATGATAG
CTCATCGTCCCTTCTAACAGAAGGCTCAAATACTTCACTAAATTCTGCAGTTACAGAACAACCTCGAGGATTATAGGCCACAAGACGATGCAAATGTTGG
GGCCAAGAAGAAACAGCAAACAGGCTAGGAACTCTCATGTAGGAAACCATTTGAAAAGAGCTCTTGTGCATACAGCTCTCATCGAAATCCTAACCTCCTT
TGAACCTCGGACAGAAAATGAAATATGTAAGACCAACATAACAGAAAATCAAAAGGAATAATGGGAGCTAAGGAAACATGTACATGTGCCCATCTTCTGA
AAAAGATCCACAACACATACAAATCCTTCAGATGACAGTTCTGTATCAAACAACTGCAACCTTCGACTGCCACGTGAAATCTTCTTCCAGCAGAATAATC
ACCAGTTTCCAGACCTGTTCTGCCTCTAGCTCATACTCCCTCCGTTCGGAATTACTCATCCAAGAAATGAATGTATCTAGATGTATTTTAGTTGTAGATA
CATCCATTTTTATCCATTTTTGTGACAAGTAATTCCGA