« Back to Triticum aestivum search


Detailed information on CNT30289432


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30180109Triticum aestivumSecale cereale38.3738.3785.97221forward

Expression of CNT30289432

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MCCGSFSEDGHRRLGFRRELYAQELFSNGYLHESS*

>peptide 2 (59 aa)
MHKSSFQMVTYMRVPSPFAVSSWPQHLHRFAAYNPRGCSVTAEFSKVFEPSVRRDDELS*

Sequence

>CNT30289432
TAAAGAAGTATGAGCTAGAGGCAGAACTGGTCTGGAAAATGGTGATTATTCTGCTGGAAGAAGATTTCACGTGGCAGTAGAAGGTTGCAGTTGTTTGATA
CAGAACTGTCATTTGGGGTTCATCTCACAAGTTTCAGTATTTGGGGTTCATCTCACAAGTTTCAGTATAGACTGAAGGATTTGTATGTGTTGTGGATCTT
TTTCAGAAGATGGGCACAGAAGGTTAGGATTTCGACGAGAGCTGTATGCACAAGAGCTCTTTTCAAATGGTTACCTACATGAGAGTTCCTAGCCCGTTTG
CTGTTTCTTCTTGGCCCCAACATTTGCATCGTTTTGCGGCCTATAATCCTCGAGGTTGTTCTGTAACTGCAGAATTTAGCAAAGTATTTGAGCCTTCTGT
TAGAAGGGACGACGAGCTATCTTAGTGAGAAATATACTCGTGTTGGTTGATACCATTCTAGTTGAGCTTTAATGTTTAGTTCTGTAGTTGATCTGATGGG
CCATTTGAATGTAAAACAAACGGTGCTGCAGACAGTAGAACCTTAGGTTCACCTCAAATAAGCTTCAAGAGTCAAG