Detailed information on CNT30289121


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30387575Triticum aestivumTriticum turgidum70.0975.081001591forward
CNT30659703Triticum aestivumTriticum dicoccoides20.0983.6795.83456forward

Expression of CNT30289121

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MWRRSDQRSGMYFPWFEYYGQIFFPRIHKLCWS*

>peptide 2 (34 aa)
MIQYGVVEDLNKRWKHLILNTTVQALGGVEQTFD*

>peptide 3 (32 aa)
MICKGAASPSPSIVTRHDVEMMERISRRMKMV*

>peptide 4 (32 aa)
MRERRIEVATKYPTNALVDRLALISLILHCRP*

>peptide 5 (41 aa)
MMPIDAATSGRSRMRPPELDNGASLDVEEVRPEERHVLPLV*

>peptide 6 (57 aa)
MLARDSTPAAAPVRRWNSWRRSWRCASYCTSTNILIFYFFANQTGNHTILFLSCKPH*

>peptide 7 (62 aa)
MQQNGVDLIFWRAESNQNMYQGTMTYLASVCEDGKIWSWHLTFDKSVSSKKINPARPLRVVR*

>peptide 8 (50 aa)
MLLVGISVLPLLHLHLRSISSLKLWERDGGICSVRCGTRYCRSCSRTAST*

>peptide 9 (86 aa)
SRVRLYDKKIHPSSSHRSSPSLMCRSKKKLAMDPFLPLEGSLYFSFGPHRHISSRTQPPKPPPPPPPPPQPFLSSSPPCSPALAYL*

>peptide 10 (43 aa)
MLVFRCELKKRLRVISSNLSVPQYKIIFQAMWDGGSIFQIVKLS

>peptide 11 (43 aa)
MVRFFSRESTSCAGLEECIKFIANLKFRDDMQGRRLSLTVHRH*

Sequence

>CNT30289121
CTCGCGCGTTCGCTTGTACGACAAAAAAATACATCCATCAAGCTCCCATCGCTCGTCCCCGTCTTTAATGTGTCGAAGTAAAAAAAAATTAGCGATGGAT
CCCTTCCTTCCCTTGGAAGGTAGCCTCTACTTTTCTTTTGGCCCACATCGTCACATCAGCTCTCGCACGCAACCTCCAAAGCCTCCGCCGCCGCCGCCGC
CGCCGCCTCAGCCATTTCTCTCGTCTTCTCCTCCCTGTTCCCCTGCCCTAGCCTATCTCTAGCACTCCGCCTCTCCCTTTCTTCCTCGAGTACGGCAGCG
GAAGGGGGGCCGCGACGGGAGAGAGGTTCTCCGCCCCCGACAGACGACGTCACCGCCTCCGACCTTGGCCTCGTCTGCAGCAGCAGGGACCTCTGCCCGT
GTGTCTCTGTCTCGCTGCTCATCCTCCGGGAGGGGACTCGGAAGGAGGGTCATGCTCCTGGTTGGGATCTCCGTGCTCCCGCTCCTGCACCTCCATCTGC
GTTCGATCTCGTCACTGAAATTGTGGGAGCGGGACGGCGGGATCTGCTCCGTCCGGTGCGGGACGCGCTACTGTCGCTCATGCAGCAGAACGGCGTCGAC
CTGATCTTCTGGAGGGCAGAGTCGAACCAGAACATGTATCAAGGGACCATGACATATCTAGCATCGGTATGTGAAGATGGCAAGATCTGGTCATGGCATC
TGACTTTTGACAAGTCAGTATCTTCCAAGAAAATTAATCCTGCTCGGCCTCTTCGCGTGGTTCGTTGAGTGATGGGTCGTGCCATTGTCTAACTGGGTGC
CCCTCGCGGCCGCCGTCTGGGCGATGATTCAGTATGGGGTTGTAGAAGATTTGAACAAAAGATGGAAGCACCTTATACTGAACACAACAGTACAGGCCTT
GGGAGGGGTTGAACAAACTTTTGATTGAAGTTTGGCCCAACTACATGGAACCGAAACTATCAAGGAAGTTTCGTGCTTGGATGCAACTCAGTAGTTGGTA
GTTCAAAAGGTTTCACAAATAACATTAGATTATACTATATGCATCTGATCCATGGAAGTTGATTATGTAGAATCAAATCATTTCAAAATTCCTTTTGATT
CTGTTGATTTGAGGTAGACGGTACACCTGCTGCAGTGGACTTCGTCGTCTCATCAGCATGCTCGCCCGCGACAGTACACCTGCTGCAGCTCCGGTGAGAC
GCTGGAACTCATGGCGGCGCTCATGGCGGTGTGCCTCATACTGTACCTCAACTAACATATTGATCTTCTACTTCTTTGCTAATCAAACTGGGAATCATAC
TATTCTCTTTCTGTCCTGTAAGCCCCACTAATCACTAGGTCTCATTACTCTTTCTATCCGACGTGGCATGCGAGAGCGAAGGATAGAGGTGGCCACGAAA
TACCCAACAAATGCACTTGTCGATCGTCTTGCTCTTATTAGCTTGATACTGCACTGTCGGCCCTGAATCCTTGGATATTGGGAAGTTTGAAGAAGCATGT
GGTGTAGATGATGCCCATCGACGCTGCTACCTCCGGAAGGTCACGGATGAGGCCACCCGAGCTGGACAACGGGGCGTCTTTGGATGTGGAGGAGGTCCGA
CCAGAGGAGCGGCATGTACTTCCCTTGGTTTGAATACTATGGTCAGATTTTTTTCCCGAGAATCCACAAGTTGTGCTGGTCTTGAAGAATGTATTAAGTT
CATTGCAAACTTAAAGTTCAGAGATGATATGCAAGGGCGCCGCCTCTCCCTCACCGTCCATCGTCACTAGACACGACGTCGAGATGATGGAGAGGATCAG
TAGAAGGATGAAGATGGTGTAGGCCATGGAGGCATGAACCCACGTTGTGGCAAGGTTTAGGACTTGCTGATCTAGAAAGGAGAGCGATCAAGAAGAGAGC
ATTCATAATTACGGAAGAACCTTGTGGTTTGCCAAAAGACTTGAAGAGATAGAAGTATCAGGTGTGGTTTTGTCACAAAAAAGGAATCTGAAGTCCTCTT
TCATGCTTTCAAAGGTGTATGTAGTACAAAGATAGAGCATAATTGATTGAAACACCATGGATGTCCTTTTTTTTACTTTCTTTTCCTTTCTTTTGAGATA
GATGTTGTTTTATTTCCCTTCCCGTAATGTATGTATAGATGCTGGTATTTCGTTGTGAACTGAAGAAGCGTCTAAGGGTTATATCCTCTAATCTCTCCGT
ACCACAATATAAAATCATTTTTCAGGCTATGTGGGATGGAGGGAGTATCTTTCAAATAGTCAAACTGTCG