Detailed information on CNT30289023


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT002454, E-value = 2e-166

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30592527Triticum aestivumMusa acuminata9.5856.5998.41189forward

Expression of CNT30289023

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MFSQSTQSESVPKETPKGLPSDGYTKVTKLL*

>peptide 2 (45 aa)
MSNEKSCEKHDRLPVEGFLCSVNLRRVNRSLRKPRKGCRPMGTRK*

>peptide 3 (33 aa)
MMSMARGRALNGLGWPPFRFTNPRETPNTGRHP*

>peptide 4 (55 aa)
NHALDGCPGIEKEGRFQRRKAMGRGFSVIHGSLIGKPYPSSVASLRSLDFSNLAI*

>peptide 5 (49 aa)
MSAKAVALPYTRIHFLAGADTDFSLKAKKKKWANTRPSGRTCRLRLRAPA

>peptide 6 (70 aa)
MTTRRWAWKQPSFEESVIAHWSSSMAPKCLRAQVIHRSDETLKAAFSSVSSGTFCQSGKVFGDKTWRYQK*

Sequence

>CNT30289023
AATCATGCATTGGATGGATGCCCGGGCATTGAGAAGGAAGGACGCTTTCAGAGGCGAAAGGCCATGGGGAGAGGTTTTTCTGTGATCCATGGATCTCTGA
TCGGGAAACCGTATCCAAGCTCCGTGGCTAGTCTGCGCTCTTTGGACTTTTCAAACTTAGCGATCTGAAACATCTGAGTAGCTAAAGGAAGGAAAATCAA
CCGAGACCCCGTTAGTAGCGGCGAGCGAGAGCGGAACAAGGGTTTTCATCAAAAGAAATCCAAAGCGGTTTCATTCGATTTGTTGTGGATTGGATGATGG
AAAAACCAGCAAGCAGCAAGCGTAGTTAGAAAAGTTGCCGTAGCGCGCCCTACGGAGTTGTACAAAGTCAGCAACCGTTTTGGGGCGCAAGCATAGGCAA
CACAGGACTGATGACGGGGTGGGGCGCGCAGTGAACTGGTTTTCTAAAAAGATTGGAAGATCCGGCCAAAGAAGGTGATAGCCCTGTTCATTCGTTCCCA
TGGTTCGATCCTTCCCAGTAAAACGCGGCGTGTTCGAATAATGATCGCTTTTACGCGAGAAAGGGGGACCACCCTCTAAGCCTAAGTATTCCTCAATGAC
CGATAGCGTACAAGTACCATGAGGGAAAGGTGAAAAGAACCCCAATCGGGGAGTGGAATAGAGAACCTAAGATCCGATGCGAACAATCAGTTGAAGGAGC
ACAGCGCGGGCGCACTCACTCTAACGGCGTACCTTTCGCATGATGGGTCAGCGAGGAAATGGGAACAACGGCTTAAGCCATTAGGTGTAGGTGCTTTCCA
GAGGTGGAAGATTTACGTTCTTCCTATTTGACCCGAAACTGATCGATCCAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGAGGACCGAACCC
ACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCCAACCAAGATCGGATATAGCTGGTTTTCCGCGAAATCTATTTCAGTAGAGCG
TATGATGTCGATGGCCCGAGGTAGAGCACTCAATGGGCTAGGGTGGCCCCCATTTCGCTTTACCAACCCCAGGGAAACTCCGAATACAGGCCGTCATCCT
TAGTACAGACAGACTGATTGGGTGCTAAGATCCAAAGTCGAGAGGGAAACAACCCAGATCGTACGCTAAGGTCCCTAAGCAATCACTTAGTGGAAAACGA
AGTGATCGAGCGATGACAACCAGGAGGTGGGCTTGGAAGCAGCCATCCTTTGAAGAAAGCGTAATAGCTCACTGGTCTAGCTCCATGGCACCGAAATGTC
TCAGGGCTCAAGTGATTCACCGAAGCGACGAGACCTTGAAAGCAGCTTTTTCAAGTGTTAGTAGCGGGACGTTCTGTCAATCGGGGAAGGTTTTTGGTGA
CAAGACCTGGAGATATCAGAAGTGAGAATGCTGACATGAGTAACGAGAAATCCTGTGAAAAACACGATCGCCTGCCAGTGGAAGGCTTTCTATGTTCAGT
CAATCTACGCAGAGTGAATCGGTCCCTAAGGAAACCCCGAAAGGGCTGCCGTCCGATGGGTACACGAAAGTGACGAAGTTGCTTTGACTACTGAACCATG
CCTGGATCGTCGGAGCGAATTGGATGATCGGGCCGAGGGCTGCCCCCTCTTCCCCTCGCTCTCCTTTCCTTAATATTCACCGTCGAGTCATCAAAGCCGT
CAACTAATTCAGAGGGGCTCGGCTGGCCCGATCGCCCTACGCTACTGGCGCTTCCAAAGGCGAAGCTCTCGTCTTTGGCGACCAGCAAACGGAGGGCTAA
AACCTGTAGTTTTGAAGCAAGGGATGAGCGCGAAAGCCGTTGCGCTTCCGTACACGCGCATACATTTTCTTGCTGGGGCGGACACAGATTTCTCTCTAAA
GGCGAAGAAAAAGAAGTGGGCGAACACTCGGCCCAGCGGGCGAACATGCCGGCTCCGGCTCCGCGCACCTGCT