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Detailed information on CNT30288841


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9XF88|CB4B_ARATH, E-value = 1e-16

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30179479Triticum aestivumSecale cereale98.1677.1797.94534forward
CNT30133575Triticum aestivumLolium perenne44.8538.3692.62244forward
CNT3013737Triticum aestivumZea mays20.0423.3992.66109forward
CNT30338965Triticum aestivumEragrostis tef18.3831.8596100forward
CNT30556732Triticum aestivumPanicum hallii35.852587.18195forward

Expression of CNT30288841

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MRPFCGAGSASRVPRNVLAAAATDEAMAARSS*

Sequence

>CNT30288841
AAACAAAAGATTAGCTCAAGATTGATGTACAAGTGGATGCATTAAGTCACCATTGGTTCATATTTTACAAATCACCAAGTCCCAGCAGCTCTCCTATGTG
ATCAGACCTGCATTAATCAACAAAGGATCTTTGCGATACCCTCTCATCCATCACTCGTCATACAAAACCAAAGCACGTTCGTACACTGACGCGCGTTCGT
CCATTTTGCAGCTGAGCTGACAGAAATTGCTCGACCACCGACCACTTAAGAGGAGCCGAAGGGGTCGAAGCCGTAGTCGCCGACGAGCGTGCCGTCGAGG
TACTCGGGCGCCTGCGCGCCGGGGAACCACAGCGGCCGGTCGGTGGTCGGGGGCGCCTTGGCCTTCTTCGGCGGGGCCTTCTTCTTGCCGAAGCCGAACC
GCGCCACGATGCGCCCGTTCTGCGGCGCCGGGTCCGCCAGCCGGGTCCCGAGGAACGTGCTCGCCGCGGCGGCCACCGACGAAGCCATGGCTGCTCGCTC
CTCCTAGCTTGTCCTCCTCGGCCTTTGCGTGCGTTGAGGTGGCG