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Detailed information on CNT30288445


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3037914Triticum aestivumCucumis melo81.6619.4589.37414forward

Expression of CNT30288445

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MLSKPIHLSETEESGISCVGVKSVDLRRNAKSEGSSLGPYR

>peptide 2 (42 aa)
MMLSWFFRMISHTGTETRPGLPRGAAVGNLGQWAKARSSNIA*

Sequence

>CNT30288445
GTTTGATGAGCCTGCGTAGTATTAAGTAGTTGGTCAGGTAAAGGCTGACCAAGCCAATGATGCTTAGCTGGTTTTTTCGGATGATCAGCCACACTGGGAC
TGAGACACGGCCCGGACTCCCACGGGGGGCAGCAGTGGGGAATCTTGGACAATGGGCGAAAGCCCGATCCAGCAATATCGCGTGAGTGAAGAAGGGCAAT
GCCGCTTGTAAAGCTCTTTCGTCGAGTGCGCGATCATGACAGGACTCGAGGAAGAAGCCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAAGACGGGGGGG
CAAGTGTTCTTCGAAATGACTGGGCGTAAAGGGCACGTAGGCGGTGAATCGAGTTGAAAGTGAAAGTCGCCAAAAAGTGGCGGAATGCTCTCGAAACCAA
TTCACTTGAGTGAGACAGAGGAGAGTGGAATTTCGTGTGTAGGGGTGAAATCCGTAGATCTACGAAGGAACGCCAAAAGCGAAGGCAGCTCTCTGGGTCC
CTACCGA