Detailed information on CNT30287995


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674586Triticum aestivumSetaria viridis26.0522.6590.9199forward
CNT30387749Triticum aestivumTriticum turgidum85.5351.0296.92325forward
CNT30586289Triticum aestivumMusa acuminata26.8435.9293.14102forward
CNT30552083Triticum aestivumOryza glaberrima26.0515.1188.8999forward
CNT30658785Triticum aestivumTriticum dicoccoides90.7997.7395.94345forward
CNT30580008Triticum aestivumEchinochloa crusgalli24.7433.5792.5594forward

Expression of CNT30287995

Peptides detected in this lncRNA

>peptide 1 (56 aa)
MSQGKYLERFYYIHPDRVSNGRLRHSRFLGLPRAKNTTSTFTIRHPEEISTYAQLS*

Sequence

>CNT30287995
GCCCATGCACACATCCATAATACAACTTTAAATAAACGTCTGTAATATCAATTGTATATCAACCACGTATGTCCCAGGGAAAATATTTGGAGCGTTTTTA
CTACATACATCCCGATCGTGTAAGTAACGGTAGGTTGAGACATAGCAGGTTTCTCGGGCTCCCACGAGCCAAGAACACCACGTCCACCTTCACCATCCGC
CATCCAGAAGAGATTAGCACGTACGCTCAGCTGTCGTAGGTGCGGCACTCGTCGGTCTCGGGGTTCTCCTTGCAGTAGTTCTCCAGCGGGTCGGAGTCCT
TGAGCTTGTCCCGGGCGTGGCTGGCTCACGTTGGTGAGCGCGGACGCCATTGCAGGGTGTGGTGGATCGACGGAGATTTT