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Detailed information on CNT30287394


BLAST search results

BLAST vs Swiss-Prot:
sp|P10707|CB2D_SOLLC, E-value = 4e-20

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30640440Triticum aestivumNymphaea colorata45.5257.0485.04381forward
CNT30587569Triticum aestivumMusa acuminata14.2235.5289.08119forward
CNT30132393Triticum aestivumLolium perenne46.7166.6187.21391forward
CNT30720416Triticum aestivumTriticum spelta35.4849.42100297forward
CNT30338969Triticum aestivumEragrostis tef20.1927.394.08169forward
CNT30596509Triticum aestivumOryza meridionalis21.7411.9795.6182forward

Expression of CNT30287394

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MVVCSGSLRWVAQLLSGPLPVAAACTAKPRKATMARRACLISASCRVSFFSGSAARPSGSK*

>peptide 2 (34 aa)
MISPARFWARFWSRESTSYCRYSAGFPRPKGSKP*

>peptide 3 (29 aa)
ELKIDVQVDALSHHWFIFYKSPSPSSSPM*

>peptide 4 (31 aa)
MRPFCGAGSASRVPRNALAAAATDEAMAARSS

Sequence

>CNT30287394
GAGCTCAAGATTGATGTACAAGTGGATGCATTAAGTCACCATTGGTTCATATTTTACAAATCACCAAGTCCCAGCAGCTCTCCTATGTGATCAGACCTGC
ATTACTCAACAAAGGATCTTTGCGATACCCTCTCATCCATCACTCGTCATATACAAAACGAAAAGCACGTTCGTTACACGGACGCGCGTTCGTCCATTTT
GCAGCCGAGCTGACAGAAATTGCTCGACCACCGACCACTTAAGAGGAGCCCAAGGTGTCGAAGATGGTGGTGTGCAGCGGGTCGCTGAGGTGGGTGGCCC
AGTTGTTGAGCGGCCCCTTGCCGGTGGCGGCGGCCTGCACGGCGAAGCCGAGGAAGGCGACCATGGCGAGGCGGGCGTGCTTGATCTCCGCCAGCTGCAG
AGTCTCCTTCTTCTCCGGGTCCGCCGCGAGACCCAGCGGGTCGAAGTAGGAGCCACCGGGGTAGAGGGGTGGACTTGACGTCGGCGTCCTCGAACCGGGT
GCCGATGATCTCGCCCGCCAGGTTCTGGGCCAGGTTCTGGTCCAGGGAGTCCACGTCGTACTGCAGGTACTCCGCGGGCTTCCCGAGGCCGAAGGGGTCG
AAGCCGTAGTCGCCGACGAGCGTGCCGTCGAGGTACTCGGGCGCCTGCGCGCCGGGGAACCACAGCGGCCGGTCGGTGGTCGGGGGCGCCTTGGCCTTCT
TCGGCGGGGCCTTCTTCTTGCCGAAGCCGAACCGCGCCACGATGCGCCCGTTCTGCGGCGCCGGGTCCGCCAGCCGGGTCCCGAGGAACGCGCTCGCCGC
GGCGGCCACCGACGAAGCCATGGCTGCTCGCTCCTCC