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Detailed information on CNT30287280


BLAST search results

BLAST vs Swiss-Prot:
sp|P26667|RBS2_WHEAT, E-value = 3e-93

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30181095Triticum aestivumSecale cereale83.0846.1793.4712forward
CNT30386515Triticum aestivumTriticum turgidum86.5853.6197.04742forward

Expression of CNT30287280

Peptides detected in this lncRNA

>peptide 1 (76 aa)
MNRMRTDAQYLVMSQLIVLTMLEKISRQAKNCSLWAALICIAGLFTINKALVILSSSIWVLFRGWVWLYTLGMFCK*

>peptide 2 (30 aa)
MKNMLWSSSRVVDKSDVHKRPSYIGHCFNS*

Sequence

>CNT30287280
GCTTGTTGTATATAATAAATATCACACATGTTTTGTATATGTGTAGCCGGTTCTAGAATTTACATATGCATGCTCGAGAACCTATGTTCGTACATACATA
CACAGACCATATAGAATGAAAAATATGCTCTGGTCGTCCAGCAGAGTCGTGGACAAAAGTGACGTTCACAAAAGACCTTCATACATAGGCCATTGTTTCA
ACTCGTAGTTTAGGCCTTGCCAGACTCCTCGCAACCCGGTGGCCTGAAGGCGATGAAGCTGACGCACTGCACCTGGCGCAGGTTGTCGAAGCCGATGACG
CGGACATAGGCGTCAGGGTACTCCTTCTTGACCTCCTCCACCTCGTTGAGCACCTGTGTGGCGTCGGTGCACCCGAACATAGGCAGCTTCCACATTGTCC
AGTATCGACCGTCATAGTATCCGGGGGAGCTATTGTGCTCACGGAAGACGAAACCAACCTTGCTGAACTCGAGGCAGGGCACCCACTTGGAGCGGATCAA
GTAGTCGACCTGCTTCAGGAGGGCTTCCGTGGAGAGGGGTGGCAAGTAAGACAGGGTCTCGAACTTCTTGATGCCCTCAATTGGCCACACCTGAATGAAT
AGAATGCGAACAGATGCTCAATACTTGGTGATGAGTCAATTAATTGTACTAACAATGCTAGAAAAAATCAGTCGACAAGCCAAAAATTGCTCCTTATGGG
CAGCTCTCATATGCATTGCTGGGTTGTTCACAATCAATAAAGCTTTGGTTATACTTAGTTCTAGTATATGGGTCCTATTTCGAGGATGGGTTTGGTTATA
TACATTGGGGATGTTCTGTAAGTGAATTACTTGCACTGACAAAGAAACTCGTATCAG