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Detailed information on CNT30287195


BLAST search results

BLAST vs Swiss-Prot:
sp|P27665|PSBO_WHEAT, E-value = 7e-125

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30547255Triticum aestivumIpomoea triloba31.4953.6583.87279forward
CNT30374900Triticum aestivumArabidopsis thaliana29.4644.7780.46261forward
CNT30266710Triticum aestivumChenopodium quinoa29.0130.0680.54257forward
CNT30524993Triticum aestivumPhaseolus vulgaris41.7632.2679.73370forward
CNT3086209Triticum aestivumVigna radiata42.8926.6977.63380forward
CNT30542247Triticum aestivumBrassica napus14.7921.9883.97131forward
CNT30238377Triticum aestivumBrassica oleracea28.6747.381.1254forward
CNT30244470Triticum aestivumAvena sativa45.3772.8393.78402forward
CNT30259787Triticum aestivumBrassica rapa27.6544.8780.41245forward
CNT309111Triticum aestivumZea mays31.4938.0191.4279forward
CNT30718209Triticum aestivumMalus domestica golden20.8813.7482.16185forward
CNT30681259Triticum aestivumTriticum urartu69.5385.6799.35616forward
CNT30348024Triticum aestivumEragrostis tef40.6358.3591.67360forward
CNT30356640Triticum aestivumLactuca sativa20.9927.9381.72186forward
CNT30704492Triticum aestivumPrunus avium28.6727.0579.53254forward
CNT30584058Triticum aestivumEchinochloa crusgalli50.3435.2392.15446forward
CNT30724288Triticum aestivumLupinus angustifolius33.0725.5778.84293forward

Expression of CNT30287195

Peptides detected in this lncRNA

>peptide 1 (62 aa)
MSLVFWKAGGSFFWMPSALTVKEVGSRQNFFISYLPALKGKESTPPSMVGHWFAVPVPFTSM*

Sequence

>CNT30287195
TCAATATCATGAGTTGTCCAGGAAGAAACAATAATAACAGAAGCTAAAATATAAACCGACACCCTGGGTTTAGATTACTAGATACACACACAAACACATT
TGTTGCCTCGATTGTTTCCTCTCCACCGATCAACCCACGTACGCATGCACACAAGATGAGTATCTTCACTTCTGCTCTGCTCTAGTTAGACTCGAGCTGC
GCGTACCACACACCCTGGATCTTGACATCCTTGGCCAACTCCTCCTCGTCTCCTCTGCCTCCGGCGGGTAGCGCCACGGCGTTGTCGTAGCCAGTAGAGC
CACCACGGCCCTTTGGGTCGAGGAAAGACGAACCCCTGTAGCTGGGCACGAGGAAGGGCCCGCTGAAGCTCTCGGGCTTGCCGGTAGCGACGAGCTGCTT
GACGGTGAAGAGGAAGGGCACTCGCTCGCCTCCGGGGAGCTGCACGGTGACGGCCGCGTAGTCGATGCCGTCCTTCTCCTCGAACTTGAGGGTGCCGTCG
GCGCCGACCTCGAGCGGGCCTTCCATCTCGTCAAGGGTGTAGGTGAGACGGGTCATGAGCTTGGTTTTCTGGAAGGCCGGCGGCTCGTTCTTCTGGATGC
CCTCGGCCTTGACGGTGAAGGAGGTGGGCTCCAGGCAGAACTTCTTCATCTCGTACTTGCCGGCCTTGAAGGGGAAGGAGTCGACGCCGCCGTCGATGGT
CGGGCACTGGTTCGCGGTGCCGGTACCCTTCACCTCCATGTAGGTCTTGCTCTGGATCTCGTCGAAGGTCAGCCTCTTGGGCGCCCGGCCGCCGATCTTG
GCCGGCATCAGCGTGGCCGCGGCTTGGAGAGACGCTGCCATGTTGGTCGGTGGCTTGGTACGCGGGAGGATCGATCCCACTCGTGG