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Detailed information on CNT30286709


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30384527Triticum aestivumTriticum turgidum13.6933.8488.7689reverse complement
CNT30720257Triticum aestivumTriticum spelta69.8591.53100454forward

Expression of CNT30286709

Peptides detected in this lncRNA

>peptide 1 (72 aa)
MSYGQSVAAGCPAGDEKKTSWSELVGKSIVEAREIILKDMPDADCGNGGLEEQPCPHLRRHCRDHTSHWLAS*

>peptide 2 (37 aa)
VLVSVKFRVSSIEFHLAARTIEDELWPECRRRMPGRR*

>peptide 3 (30 aa)
MGLIAPLKVTFAQSTAINLVLYLLLCGGDT*

Sequence

>CNT30286709
AAGTACTCGTCTCGGTCAAGTTCAGAGTAAGCTCCATCGAGTTCCATTTAGCTGCTCGCACAATTGAGGATGAGCTATGGCCAGAGTGTCGCCGCCGGAT
GCCCGGCCGGAGATGAGAAGAAGACGTCATGGTCGGAGTTAGTGGGGAAGTCTATCGTAGAGGCCAGAGAGATCATCCTCAAGGACATGCCTGATGCGGA
CTGCGGTAACGGAGGACTTGAGGAGCAACCGTGTCCGCATCTTCGTCGACACTGTCGCGACCACACCTCACATTGGCTAGCTAGCTAGCTTTGCTCGCTA
GGAGCGACGTGCATGCGTCAGGCGTCACGGATGCTGATGACCAAGTAATAATTTTCAATAATGGATGCATAAGTACATGCTCGACGGATCATCCTACTTT
TGTGTTTGGGTTATGGATCCATGTGCTCGACTGGTTAATTATTTGTAGTTTCCGTTTTTTCCATTTTTGGATCAACTGCTACTATGTTAATTAACTATCG
CAGTGGTCTTCGCAAATCAAAGAGCATACCGTAGAGGAAGTGTAATATGGGGCTTATAGCCCCTCTAAAAGTCACTTTTGCACAGAGCACGGCGATAAAC
TTAGTATTGTACTTGCTCTTATGTGGAGGAGATACATAAAAAAACAAGGG