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Detailed information on CNT30286679


BLAST search results

BLAST vs Swiss-Prot:
sp|P16063|ICIB_HORVU, E-value = 1e-15

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30555553Triticum aestivumOryza glaberrima14.3126.9980.37163forward
CNT30444168Triticum aestivumAegilops tauschii21.0775.2498.75240forward
CNT30456979Triticum aestivumSaccharum spontaneum15.129.2583.14172forward
CNT30578593Triticum aestivumOryza barthii14.3150.1580.98163forward

Expression of CNT30286679

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MKQRGVVAHPCASLKHMHHSEQRINQLTPFLSLGGMPC*

>peptide 2 (76 aa)
MRTRLGLKSSVTAEPTGTMTMSASGLSFRMISLASLMLSPTTSGHEVFFPPARSSEELIFVALVDNLRSIDQSEIA*

>peptide 3 (29 aa)
MHCFLFGGVAFGEPHLYFGCCLRWLVECY*

>peptide 4 (33 aa)
MLVIHHRGRVFFSVPFIFLFGCVFLMPLNILLV*

Sequence

>CNT30286679
CGTGATAAATCTTCCCTATAAATAGGGCAAGTGTTATGCAAATACTCATATCAGTCAAGTTCAGAGTAAGCTCGAAGTCCATTTAGCTGGGTCTTATTGA
AGGCATTGTTTTTAGGTGAACTCGGACTTTCTCCAGGGTGAAGATCCAAGATCTTCGATCGAGCAACGACAACGCTTATGCATTGTTTCCTTTTTGGGGG
CGTTGCTTTTGGAGAACCTCATTTGTATTTCGGGTGTTGTCTTCGGTGGTTGGTAGAGTGCTACTGATGCTAGTGATTCATCACCGTGGCAGGGTCTTTT
TTTCTGTTCCTTTTATTTTCCTTTTTGGCTGTGTATTCTTGATGCCTTTGAACATCTTGTTGGTATAGAGTCCGGGTGTAATTGGTATCTTTGTGATATT
AATATGTTCCTTTTGTCAAAAAAATTAAGATAGGAAGTAAGAATTATATACAAATAAGCACCACATAAACGGCAGCCCAAACTTCCCATTCCGTCATCGC
AACACTAAGTAACTACTCGCTTAAGACTATCTTTCTCCATCTTCCGTGACTCAAGGCAATGCTGGTGAATTTTATCGACTACTGATGTATGAAGCAGAGA
GGTGTTGTTGCACACCCTTGTGCTTCTCTCAAGCACATGCATCATAGCGAGCAGAGGATCAACCAGTTGACACCTTTTCTCAGCTTGGGAGGGATGCCCT
GCTGAAGATCAGACCACCAGGTGAGGACGTCTGGTTCGGCAGGAAGATCCATCTCAGGATGTGAGACCAGACCTCACGCGCAAGACCATCATTAGGTGCT
CGGTCGTTTCCTTAGGCCACAGCAAGCCAGCAAGAGCTATCCACCTATACAACGTGGGGGGTCTCGGCGACGGTGCCCACGAAGATGCGGACACGGTTGG
GCCTCAAGTCCTCGGTCACGGCGGAGCCGACCGGCACCATGACAATGTCGGCGTCGGGCTTGTCCTTCAGGATGATCTCCTTGGCCTCCTTGATGCTCAG
CCCCACCACCTCCGGCCACGAAGTCTTCTTTCCACCGGCGAGGTCGTCGGAGGAACTCATCTTCGTAGCACTGGTTGATAACTTGAGATCGATCGATCAA
TCAGAGATAGCTTAATTGAGGCGGAGTGAGGTATTTCAG