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Detailed information on CNT30286420


BLAST search results

BLAST vs Swiss-Prot:
sp|P16063|ICIB_HORVU, E-value = 5e-14

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30578577Triticum aestivumOryza barthii10.6946.9981.1164forward

Expression of CNT30286420

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MKQRGVVEHPCASLKHMHHSEQRINQLTPFLSLGGMPC*

>peptide 2 (29 aa)
MHCFLLGGVAFGEPHLYFGCCLRWLVECY*

>peptide 3 (76 aa)
MRTRLGLKSSVTAEPTGTMTMSASGLSFRMISLASLMVSPTTSGDEVFFPPARSSEELIFVALVDNLRSIDQSEIA*

Sequence

>CNT30286420
GTTCAGAGTAAGCTCGAGGTCCATTTAGCTGGGTCTTATTGAAGGCATTGTTTTTAGGTGAACTCGGACTTTCTCCAGGGTGAAGATCCAAGATTTTCGA
TCGAGCAACGACAACGCTTATGCATTGTTTCCTTCTTGGGGGCGTTGCTTTTGGAGAACCTCATTTGTATTTCGGGTGTTGTCTTCGGTGGTTGGTAGAG
TGCTACTGATGCTAGTGATACATCACCGTGGCAGGGTCTTTTTTTCTGTTCCTTCTATTTTCCTTTTTGGCTGTGTGTATTCTTGATGCCTTTGAACATC
TTGTTGGTATAGAGGCCGGGTGTAATTGGTATCTTCGTGATATTAATATGTTCCTTTTGTCAAAAAAAATTTAGATAGGAAGTAAGAATTATATACAAAT
AAGCACCACATAAACGGCAGCCCAAACTTCCCATTCCGTCATCGCAACACTAAGTAACTACTCGCTTAAGACTATCTTTCTCCATCTTCCTTGACTCAAG
GCAATGCTGGTGAATTTTATCGACTACTGATGTATGAAGCAGAGAGGTGTTGTTGAACACCCTTGTGCTTCTCTCAAGCACATGCATCATAGCGAGCAGA
GGATCAACCAGTTGACACCTTTTCTCAGCTTGGGAGGGATGCCCTGCTGAAGATCAGACCACCAGGTGAGGACGTCTGGTTCGGCAGGAAGATCCATCTC
AGGATGTGAGACCAGACCTCACGCGCAAGACCATCATTAGGTGCTCGGTCGTTTCCTTAGGCCACAGCAAGCCAGCAAGAGCTATCCACCTATCCAACGT
GGGGGGTCTCGGCGACGGTGCCCACGAAGATGCGGACACGGTTGGGCCTCAAGTCCTCGGTCACGGCGGAGCCGACCGGCACCATGACAATGTCGGCGTC
GGGCTTGTCCTTCAGGATGATCTCCTTGGCCTCCTTGATGGTCAGCCCCACCACCTCCGGCGACGAAGTCTTCTTTCCACCGGCGAGGTCGTCGGAGGAA
CTCATCTTCGTAGCACTGGTTGATAATTTGAGATCGATCGATCAATCAGAGATAGCTTAATTGAGGCGGAGTGAGGTATTTCAGCAACAAACTAAACAAG
AAGATCAGTTGAGGCACATCTAGTTGCTACTCACCGATTGATGGACGGTCTTCTCCGAGCTGATGGACGTACGGCCGATGATATTCGATGATTGACCGGC
TAGCAAAAGTTGCGCTGTGCGTGAGACTTGATTTGCATAACACATTGGTCGAGTGATGTAATATAGTAGAGAGATTACGAGTAGGTAGCAGCTTCATTTT
CCACCCATGGTACCTTCTAGTAGAGCATCTCCAACAGCCGCGGAACACGTGGCGCGCTAAAAAATAGTTTGCGGCGCGCCCATCGTCAGGTTTGGCGCGG
CGCGCAGCGCTGGCTCCAGCAGCCGCGCTAAAATACAGCGCGCGCGCAGCTCCTGTAGCTCCGCACATGTCCATATTTGTTGCATTTTGAACACAAAATA
AATTCATAGCATAGATATAAAAAACGATACAAAG