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Detailed information on CNT30286326


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697502Triticum aestivumOryza sativa9.925.8786.5982reverse complement
CNT30578397Triticum aestivumOryza barthii9.924.8587.882reverse complement

Expression of CNT30286326

Peptides detected in this lncRNA

>peptide 1 (84 aa)
MSSTGTSPAAARRRRGRRWSGCRPMRQGRHPQGQARRRRDLRAFRGGGAAGPQAKPRPRLRRHHRQRGDRRPRPQGWLGCMVSS*

>peptide 2 (29 aa)
MYGPAKEGNTKYSLREQFASIYGLWSSSS*

>peptide 3 (45 aa)
TAHIDLPLLQIEAYNNQRCPSPSTDICLCSVAGRSSVEQIKPVGT*

Sequence

>CNT30286326
ACCGCCCACATCGATCTCCCACTCCTACAAATAGAGGCATATAACAACCAACGTTGTCCAAGTCCATCAACTGATATTTGCCTGTGCTCTGTCGCCGGCC
GTTCATCAGTTGAACAGATCAAACCGGTCGGTACGTAGGTAAGCTCAAGGTCAACTGCAATCCTTCGATCATTCCTACAATCTGGTACTCCAGTTATCGA
TTTAGATCAAACCGGACGGTCGCAGAGGTGCCGTGCGTGCGACGATGAGCTCCACGGGAACGTCGCCGGCGGCGGCAAGAAGGCGTCGTGGCCGGAGGTG
GTCGGGCTGCCGGCCGATGAGGCAAGGCCGTCATCCTCAAGGACAAGCCCGACGCCGACGTGATCTTCGTGCCTTTCGGGGCGGGGGTGCAGCAGGACCT
CAGGCTAAACCGCGTCCGCGTCTTCGTCGGCACCATCGCCAGCGTGGTGACCGTCGTCCTCGCCCCCAAGGTTGGCTAGGGTGTATGGTTAGCTCATGAA
ATAATGATATCAACTTGCAAATTGATTTCATTTATGTGTGTTGTTGTATTGTTTAATGTTTATTTTTGAGTTTCGGTTTTAAGACACGTAATGGTGAAAC
GTTGAATTTGCGGGCATGTACGGCCCTGCGAAAGAAGGCAACACAAAGTACTCCCTCCGTGAACAATTTGCGAGCATCTATGGCCTATGGAGTAGTAGTA
GCTAGCAGGCTGCATATTTGACCCTGCAAGAGGCAACAGTAAATAGCTGTGGAGCAGCACCTGACTGCAAGGGCATGTCATTATATTTGTATATTTGACC
ATGATTTGGAAAAAAAATCAAAAACGAC