« Back to Triticum aestivum search


Detailed information on CNT30286278


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690383Triticum aestivumOryza sativa29.1112.6989.4185forward
CNT30672671Triticum aestivumSetaria viridis30.1421.7392.0588forward
CNT30520803Triticum aestivumSetaria italica32.1921.2294.6894forward
CNT30225874Triticum aestivumHordeum vulgare36.992.7696.3108reverse complement
CNT30383152Triticum aestivumTriticum turgidum85.2739.8495.18249forward
CNT30552437Triticum aestivumOryza glaberrima29.1120.1489.4185forward
CNT30434913Triticum aestivumAegilops tauschii54.1121.12100158reverse complement
CNT30655558Triticum aestivumTriticum dicoccoides92.4771.0594.44270forward
CNT30143507Triticum aestivumLolium perenne20.219.4493.2259forward
CNT3015104Triticum aestivumZea mays30.8227.2791.1190forward
CNT30678966Triticum aestivumTriticum urartu85.2748.5496.39249forward
CNT30719808Triticum aestivumTriticum spelta93.1563.8594.49272forward
CNT30595633Triticum aestivumOryza meridionalis29.1126.1589.4185forward
CNT30369401Triticum aestivumOryza glumipatula29.1119.2789.4185forward
CNT30148777Triticum aestivumBrachypodium distachyon29.119.5497.6585forward
CNT3099956Triticum aestivumOryza rufipogon29.117.9389.4185forward
CNT30574749Triticum aestivumOryza barthii29.1122.4989.4185forward
CNT30115687Triticum aestivumOryza nivara29.1119.1489.4185forward

Expression of CNT30286278

Peptides detected in this lncRNA

>peptide 1 (80 aa)
AGDDTLGGGELVVMVLACLSSSSSCSPLPAGLLGAGSVAAAAGAAARGAALAAGAAPAVAAAARHPPFLGGWRRGKEAKD*

Sequence

>CNT30286278
GGCTGGTGATGATACGCTGGGTGGTGGTGAACTGGTGGTGATGGTGCTTGCTTGCTTGTCCTCCTCATCCTCGTGCTCGCCTCTGCCGGCCGGCCTCCTG
GGCGCCGGCTCAGTTGCAGCTGCAGCAGGAGCAGCCGCACGCGGTGCCGCACTTGCAGCCGGCGCCGCACCCGCAGTTGCCGCCGCAGCAAGACATCCTC
CTTTCCTTGGTGGGTGGCGGCGAGGGAAGGAAGCTAAGGACTGAGAGGATGCTGTGAGGACTGAGGAGGCTGGTGTGCTTGCTTGGTGAGGA