Detailed information on CNT30285966


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 3e-130

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30383121Triticum aestivumTriticum turgidum100.2670.4497.15386reverse complement
CNT30585598Triticum aestivumEchinochloa crusgalli100.2671.0993.78386forward

Expression of CNT30285966

Peptides detected in this lncRNA

>peptide 1 (46 aa)
HSLTLFSKSFSSFPHGTCSLSVSRLYLALDGVYRPIWAAFPNNPTR*

>peptide 2 (64 aa)
ALFDSLFKVIFIFPSRYLFAIGLSPVFSLGRSLPPDLGCIPKQPDSLTAPRGATGPGRTGLSPS*

Sequence

>CNT30285966
GCACTCTTTGACTCTCTTTTCAAAGTCATTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCGCCTGTATTTAGCCTTGGACGGAGTCTAC
CGCCCGATTTGGGCTGCATTCCCAAACAACCCGACTCGTTGACGGCGCCTCGTGGAGCGACAGGTCCGGGCCGGACGGGGCTCTCACCCTCCTAGGCGCC
CCTTTCCAGGGGACTTGGGCCCAGTCCGTCGCTGAGGACGCCTCTCCAGACTATAATTCGGACGGCACAGCCGCCCGATTCTCAAGCTGGGCTACTGCCG
GTTCGCTCGCCATTACTAGGGGAATCCTTGTAAGTTTCTTCTCCTCCGCTTATTTATATGCTTAAACTCAGCGGGTAGTCCCGCC