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Detailed information on CNT30285918


BLAST search results

BLAST vs Swiss-Prot:
sp|P20143|PSAH_HORVU, E-value = 7e-37

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693639Triticum aestivumOryza sativa22.9811.2789.81108forward
CNT30673198Triticum aestivumSetaria viridis22.9847.3788.89108forward
CNT30521234Triticum aestivumSetaria italica22.9814.9488.89108forward
CNT30178026Triticum aestivumSecale cereale40.2133.8798.41189forward
CNT30384456Triticum aestivumTriticum turgidum40.8535.8998.96192forward
CNT30591852Triticum aestivumMusa acuminata17.8720.1484.5284forward
CNT30435258Triticum aestivumAegilops tauschii32.5553.8799.35153forward
CNT30240454Triticum aestivumAvena sativa45.9661.3693.06216forward
CNT30130322Triticum aestivumLolium perenne44.0425.4694.2207forward
CNT3010486Triticum aestivumZea mays22.1311.4385.58104forward
CNT30679989Triticum aestivumTriticum urartu94.6892.3289.21445forward
CNT30720193Triticum aestivumTriticum spelta32.5528.0299.35153forward
CNT30338878Triticum aestivumEragrostis tef22.5513.5985.85106forward
CNT30370255Triticum aestivumOryza glumipatula22.9816.9589.81108forward
CNT30149479Triticum aestivumBrachypodium distachyon37.2345.4589.71175forward
CNT30101773Triticum aestivumOryza rufipogon22.9813.1189.81108forward
CNT30496965Triticum aestivumDigitaria exilis22.9831.7687.96108forward
CNT30116717Triticum aestivumOryza nivara22.9813.1489.81108forward
CNT30604129Triticum aestivumOryza punctata22.9817.2288.89108forward

Expression of CNT30285918

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MHAASFQLLIQSTKIKYQQSKHIDKGGIDEIHGTQARGEAGGGRRP*

>peptide 2 (32 aa)
MVHKHEARREEEEGLDCRALDLAAWSRGGRWR*

Sequence

>CNT30285918
ATTTAAACCGCCAGTATAGCAAAAACATGGTACAAAAACCATGATCTAATAATTGCATGCACCATGCACGCAGCATCTTTCCAATTACTGATACAAAGTA
CAAAGATCAAGTATCAACAGAGCAAGCACATAGATAAGGGGGGAATCGACGAGATCCATGGTACACAAGCACGAGGCGAGGCGGGAGGAGGAAGAAGGCC
TTGATTGCAGAGCTTTAGATCTTGCCGCGTGGTCCCGGGGTGGGCGGTGGCGCTGACGTAGGCGAGCAGCGAGCCGCCGCCGAGCAGCAGCACCTTGAGC
AGCAGCCCCCGCTTGGTGAAGGGCGCGGCGAAGGTGTTGAAGAACTTGCTCTGCAGGCCGTTGTAGGGCGACGCGGCGTCGCTGCCGTACAGGTCCCACT
GCCCCGTCGTGTTGGCGATGTCGTCCAGGTCGAAGTAGACGCTCTTCTCCCCGTACTTGGCCACCACCGC