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Detailed information on CNT30285178


BLAST search results

BLAST vs Swiss-Prot:
sp|Q76H85|H4_SILLA, E-value = 2e-52

BLAST vs NONCODE:
NONGMAT000508, E-value = 1e-43

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30549690Triticum aestivumIpomoea triloba39.2444.2987.1186forward
CNT3082467Triticum aestivumBrassica juncea52.9535.0182.47251forward
CNT30261175Triticum aestivumBrassica rapa45.9946.1980.28218forward
CNT30135649Triticum aestivumLolium perenne66.2461.2196.5314forward
CNT30496126Triticum aestivumDigitaria exilis66.2446.1894.27314forward

Expression of CNT30285178

Peptides detected in this lncRNA

>peptide 1 (51 aa)
MRPEMRFTPPLRARRRIAGLVMPWMLSRSTFLWRLAPPLPRPLPPLPRPDMV

Sequence

>CNT30285178
CACAAAGACAAGCTCGATTTCCAAACTCCAGATGCGAATAGCTTTGTTTCATGATTCACTTGGAACTACAGGGGAAATAGCGAACTAGACAAGTCAGGTT
CTCATCGAGCTTTAGAAATCTGCAGGGGGGAGACGAAGATTGACGACCACGAAGGGCCTAGCCGCCGAAGCCGTAGAGGGTGCGGCCCTGGCGCTTGAGC
GCGTAGACGACGTCCATGGCGGTGACGGTCTTGCGGCGGGCGTGCTCGGTGTAGGTGACGGCGTCGCGGATGACGTTCTCGAGGAAGATCTTGAGCACGC
CGCGGGTCTCCTCGTAGATGAGGCCGGAGATGCGCTTCACGCCGCCCCTCCGAGCGAGGCGCCGGATCGCCGGCTTGGTGATGCCCTGGATGTTGTCGCG
CAGCACCTTCCTGTGGCGCTTGGCGCCGCCCTTGCCGAGACCCTTGCCTCCCTTGCCGCGCCCGGACATGGTCG