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Detailed information on CNT30284960


BLAST search results

BLAST vs Swiss-Prot:
sp|A8Y9D1|RR7_LOLPR, E-value = 5e-68

BLAST vs NONCODE:
NONOSAT000698, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30730546Triticum aestivumCorchorus capsularis64.9897.6390.81577forward
CNT30406883Triticum aestivumBeta vulgaris26.2490.6687.98233forward
CNT30201818Triticum aestivumPisum sativum38.6324.9192.13343forward
CNT30384007Triticum aestivumTriticum turgidum92.7994.3999.03824forward
CNT30569656Triticum aestivumActinidia chinensis86.2690.9791.38766forward
CNT3083498Triticum aestivumVigna radiata20.8379.7483.24185reverse complement
CNT30543269Triticum aestivumBrassica napus83.2224.9791.47739forward
CNT30509374Triticum aestivumSolanum lycopersicum22.86101.587.68203forward
CNT3018194Triticum aestivumZea mays53.3880.8997.05474forward
CNT30610163Triticum aestivumGossypium raimondii26.3543.9885.47234forward
CNT30228329Triticum aestivumAnanas comosus22.9798.5591.18204forward
CNT30364733Triticum aestivumSorghum bicolor14.352.0590.55127forward
CNT30356947Triticum aestivumLactuca sativa56.7699.892.06504forward
CNT30324879Triticum aestivumAsparagus officinalis22.7557.5590.1202reverse complement
CNT30331679Triticum aestivumDioscorea rotundata67.3487.390.8598forward
CNT30604848Triticum aestivumOryza punctata23.6564.2292.86210reverse complement

Expression of CNT30284960

Peptides detected in this lncRNA

>peptide 1 (85 aa)
MANTRYISSDFKSEVNRTLATLRKAKLGFLGLIVEKLTDKSPLLSLYRTVHEIFTSYGSSVNSFEGILFLVRESPPFFHSVPKTN*

>peptide 2 (47 aa)
FWDASNNQRMASALPCLDPISIETFRVDPFLSRRVFTPILGVTLRIA*

>peptide 3 (38 aa)
MRFSPHTAPRSILSKGSFSSFESLRPSSTPSRRLTKTN*

>peptide 4 (31 aa)
MRYLTPGKSLTLPPLTNTTECSCKLWPIPGI*

Sequence

>CNT30284960
GCTTTTGGGATGCTTCTAATAACCAACGAATGGCAAGTGCTCTTCCTTGTTTAGATCCTATTTCAATCGAAACTTTCCGCGTCGATCCTTTTTTATCACG
TCGTGTTTTTACTCCTATATTGGGAGTTACTCTACGTATTGCTTGACGTAAAACCAATAGTGGATTTGTTTCTGTCTTTTGTTGAATCTTTTTCACGGCT
CGATAGAGAATTTGATAAGCCAATGATTTTTTTCCGTCTTTCATAATACGGTTAACCACCATGTTAACTAATCGATTACGAAAAATTGGATCGGATTTTG
CAGTTCTTTTTTCTGCAGTACCTTGACGTGACATGAGCGTGAAAGAGGTTCAAAATCTGTTTTCTTTTTATAAGGGCTAAAATCACTTATTTTTTTGGCT
TTTTGACCCCATATTTAGAACGCCCTTGTTGACGATTCTTTACTACGACATCATCTAGGGTTCCTCGAATAATGCGATATCTCACACCGGGTAAATCCTT
AACCCTTCCTCCTCTTACTAATACTACAGAATGTTCTTGTAAATTATGGCCAATACCAGGTATATAAGCAGTGATTTCAAATCAGAGGTTAATCGTACTC
TGGCAACTTTACGTAAGGCAAAGTTGGGTTTTTTGGGGTTGATAGTGGAAAAGTTGACAGATAAGTCACCCTTACTGTCCCTTTACAGAACCGTACATGA
GATTTTCACCTCATACGGCTCCTCGGTCAATTCTTTCGAAGGGATCCTTTTCCTCGTTCGAGAGTCTCCGCCCTTCTTCCACTCCGTCCCGAAGACTAAC
TAAGACCAATTGAGTCACGTTTTCATGTTCTAATTGAACACTTTCCATTTATGATATGATTAAAGGAGAAGATTGTTCTTTTACCAAA