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Detailed information on CNT30284133


BLAST search results

BLAST vs Swiss-Prot:
sp|P07369|CB2G_SOLLC, E-value = 6e-174

BLAST vs NONCODE:
NONMTRT001605, E-value = 2e-45

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30534416Triticum aestivumEucalyptus grandis44.3254.7184.9616forward
CNT30189796Triticum aestivumSecale cereale57.6372.3687.89801forward
CNT30225559Triticum aestivumHordeum vulgare56.7670.7687.45789forward
CNT30383589Triticum aestivumTriticum turgidum54.75100100761forward
CNT30435325Triticum aestivumAegilops tauschii32.4575.895.34451forward
CNT30241578Triticum aestivumAvena sativa57.5575.8388.75800forward
CNT30138598Triticum aestivumLolium perenne58.3566.9186.31811forward

Expression of CNT30284133

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MAHRQWITSSSRFLAKVSGSAESPAVSHP*

>peptide 2 (43 aa)
MACTKKPNIENMARRPFLTSFTLSSANASGSSAKPSGSKLPPG*

>peptide 3 (33 aa)
MEQHTGYIQDMKQAGRSNHFPKDPCNLHHDVTI*

>peptide 4 (31 aa)
MRYPSTAPMSTTWHAQIARMLCACTRLGLPR*

>peptide 5 (47 aa)
MMLQFEPPIMCAVHRSCLDIWLQLAASERQRLTCRGQSLWQTPMRCC*

>peptide 6 (38 aa)
MPLDRQPSPVGRSCPRGRVGRLPHRVGRQQCGTPQQRP*

Sequence

>CNT30284133
AGCATGATCACGATGGTCGATGGACCATAAGAAAATGAGAGCATAAGTTGCCATCACGAAGAGCGACCTCTGACTAAGTAACGCCCAAGTATTCATCGTT
CTCATTTCTCATGGAGCAACACACAGGCTACATCCAGGACATGAAGCAAGCGGGCAGATCAAACCATTTCCCCAAAGATCCTTGTAATTTACACCATGAT
GTTACAATTTGAACCACCCATTATGTGTGCAGTTCACCGCAGTTGCCTTGATATATGGCTACAACTCGCAGCTAGCGAGCGCCAACGCCTCACTTGCCGG
GGACAAAGTTTGTGGCAAACGCCCATGCGTTGTTGTTGACAGGGTCGGAGAGGTGGTCAGCGAGGTTCTCGAGTGGGCCCTTGCCGGTGACGATGGCCTG
CACGAAGAAGCCAAACATAGAGAACATGGCGAGGCGACCGTTCTTGACTTCCTTCACCTTGAGCTCCGCGAATGCCTCTGGATCGTCAGCCAAGCCCAGT
GGGTCGAAGCTGCCCCCGGGGTAGAGTGGGTCGACTACCTCACCGAGTGGGCCGCCAGCAATGCGGTACCCCTCAACAGCGCCCATGAGCACGACTTGGC
ATGCCCAGATAGCAAGGATGCTTTGTGCGTGCACGAGGCTGGGGTTGCCCAGGTAGTCGAGGCCACCCTCGCTGAAGATCTGGGAACCGGCCTTGAACCA
TACCGCCTCGCCGAACTTGACGCCGTTGCGTGCAAGAAGCTCGGGGAAGACGCATCCAAGCGCACCGAGCATGGCCCACCGGCAGTGGATCACCTCGAGC
TCCCGGTTCTTGGCAAAGGTCTCGGGGTCGGCCGAGAGCCCGGCGGTGTCCCATCCGTAGTCGCCGGGGAACTCGCCGGTCAAGTAGCTCGGGGGCTCTC
CGGAAAGCGGGCCGAGGTAGAGCACACGGTCGGCACCGTACCATGGGCTGCCTGATGAAACCGGCTTGGCCTTTGCAGCGGTCTTGCGCATAGTGACACG
GGCCTCACCAAAGAGAGCTGATGAAGCCACGTTCTTCACCGACTTGCCGGCGAAGGTCGAGGAGAGGGACATGGTGGTGGTCGCCATTGCGCTGCTAAGG
TGGGAGGTGTATTGTGTGTTCTCCAAACAATGAAAACTGAAGAGTGTGGAGATGGTTTGAGACGTGTGGAGGATGGAGCTATTTAAGGAACTGGAGCTAA
CATAGGGGATTGTGCTCTGGTCTGTGTGTGTAGGGACATGGTGGTGGTCGCCATTGCGCTGCTAAGGTGGGAGGTGTATTGTGTGTTCTCCAAACAATGA
AAACTGAAGAGTGTGGAGATGGTTTGAGACGTGTGGAGGATGGAGCTATTTAAGGAACTGGAGCTAACATAGGGGATTGTGCTCTGGTCT