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Detailed information on CNT30284090


BLAST search results

BLAST vs Swiss-Prot:
sp|P93276|M030_ARATH, E-value = 4e-22

BLAST vs NONCODE:
NONCQUT002726, E-value = 1e-79

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30574572Triticum aestivumVitis vinifera27.533.4396.97231forward
CNT30335929Triticum aestivumCynara cardunculus12.0427.3798.02101forward

Expression of CNT30284090

Peptides detected in this lncRNA

>peptide 1 (54 aa)
HALDGCPGIEKEGRFQRRKATGRYFSVIHGSLIGKPYPSSVASLRSLDFSNLAN*

Sequence

>CNT30284090
TCATGCATTGGATGGATGCCCGGGCATTGAGAAGGAAGGACGCTTTCAGAGGCGAAAGGCCACGGGGAGATATTTTTCTGTGATCCATGGATCTCTGATC
GGGAAACCGTATCCAAGCTCCGTGGCTAGTCTGCGCTCTTTGGACTTTTCAAACTTAGCGAACTGAAACATCTGAGTAGCTAAAGGAAGGAAAATCAACC
GAGACCCCGTTAGTAGCGGCGAGCGAGAGCGGAACAAGGGTTTTCATCAAAAGAAATCTGAAGCGGTTTCATTCGATTTGTTGTGGATTGGATGATGGAA
AAACCAGCAAGCAGCAAGCGTAGTTAGAAAAGTTGCCGTAGCGCGCCCTACGGAGTTGTACAAAGTCAGCAACCGTTTTGGGGCGCAAGCATAGGCAACA
CAGGACTGATGACGGGGTGGGGCGCGCAGTGAACTGGTTTTCTAAAAAGATTGGAAGATCCGGCCAAAGAAGGTTATAGCCCTGTTCATTCGTTCCCATG
GTTCGATCCTTCCCAGTAAAACACGGTGTGTTCGAATGATGATCACTTTTACGCGAGAAAGGGGGACCACCCTCTAAGCCTAAGTATTCCTCAATGACCG
ATAGCGTACAAGTACCGCGAGGGAAAGCGTAATAGCTCACTGGTCTAGCTCCATGGCACCGAAAATGTCTCAGGGCTCAAGTGATTCACCGAAGCGACGA
GACCTTGAAAGCAGCTTTTTCAAGTGTCAGTAGCGGGACGTTCTGTCAATCGGGGAAGGTTTTTGGTGACAAGACCTGGAGATATCAGAAGTGAGAATGC
TGACATGAGTAATGAGAAATCCTGTGAAAAACACGATCG