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Detailed information on CNT30284042


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SF55|H2B5_ARATH, E-value = 4e-34

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3072234Triticum aestivumQuercus suber85.4427.9481.25176forward
CNT30510004Triticum aestivumSolanum lycopersicum21.3614.4393.1844forward
CNT30724478Triticum aestivumLupinus angustifolius28.169.6291.3858forward

Expression of CNT30284042

Peptides detected in this lncRNA

>peptide 1 (67 aa)
GIWGLDLPGRDGGLLVVAGELGRLPGELLEDVVDEGVHDGHGLGGDADVGVHLLQHLEDVDLVRLHAL

>peptide 2 (29 aa)
MSLMKEFMMDMALEEMPMSGCTCFSTLKM*

Sequence

>CNT30284042
GGGGGATTTGGGGTCTGGATCTCCCGGGACGTGATGGTGGGCTTCTTGTTGTAGCGGGCGAGCTTGGCCGACTCCCCGGCGAGCTTCTCGAAGATGTCGT
TGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGTGCACCTGCTTCAGCACCTTGAAGATGTAGATCTTGTACGTCTCCAC
GCCCTT