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Detailed information on CNT30283705


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30382812Triticum aestivumTriticum turgidum22.9351.0399.07321forward
CNT30656215Triticum aestivumTriticum dicoccoides25.8649.9399.45362forward
CNT30719891Triticum aestivumTriticum spelta14.4339.61100202forward
CNT30583976Triticum aestivumEchinochloa crusgalli4.520.9387.363forward

Expression of CNT30283705

Peptides detected in this lncRNA

>peptide 1 (30 aa)
KNCFLLPHPADTSRFHYFTEVSSMREDSTR*

>peptide 2 (29 aa)
MRMPMVAGEHALDVDGVVAVAAEERLASR*

>peptide 3 (75 aa)
MHVHPLNRHFVGVGAANGAEVNADADGCRRACPRRGWSRRSSGRRAPGLQVEDDGGDSTRVPEGRRSSSRFPHRV*

>peptide 4 (73 aa)
MSMVAGELTLDVDGVVVVAAKERLASRQKTMAAIARVFPEEDEAPHASPIVASMHDGGKWLAISFLIGWMHLR*

>peptide 5 (43 aa)
MAAIARVFPKEDEAPRASPIVSSMHDGGRRFAISFLIRWMRPR*

Sequence

>CNT30283705
AAAGAATTGCTTTCTCTTGCCTCATCCGGCGGACACTTCTAGGTTCCATTATTTCACTGAAGTGAGCTCCATGAGAGAGGATTCCACAAGGTGAGGTCCG
CCGTGAGGGGTGGCCAGCGATGTGAGGGAGCAGCCGCGACCAGCGCTAGCAGAGTCCAACGCGCCCAAGCCCCGGCCAAGGCTATAGCAGCTGCTTTCGC
GTGCCGTCGTTCCCCTCCAGCAGATCCCTGGGAGAAGGCGGGGAACTGCAGGGCGTCCGACCGGCTGGGTGAAGCGCCGCTTCGCCGTGATGTCGCAGGA
GGTCGTATAGGCGCACATCAAGATGGCGTACATCACCATTACGGCCACCTTTTCTGCTCAGACACTTTGTCGGCGTGGGTGCTGCGAACGGAGCTGAAGT
CAACGCGGATGTCGATGGTTGCTGGAGAGCTTACCCTGGACGTGGATGGAGTCGTCGTAGTAGCGGCAAAAGAGCGCCTGGCCTCCAGGCAGAAGACGAT
GGCGGCGATAGCACGTGTGTTCCCGGAGGAAGATGAAGCTCCTCATGCTTCCCCCATCGTGGCTAGCATGCATGATGGCGGCAAGTGGCTCGCCATTAGC
TTCCTAATAGGATGGATGCATCTGAGATAAGTTTTTTAATAGGATCGATTTGTCTGAGATTAGTTTCCTAATAGGATGGATTTGTCTGAGATTAGTTTCC
TAGAATAGGATGCACCAGTGATTATTAGTTTCCTAATTGCTCAGGCATGGAGTTTCATATTTTCCTCCACGGTGGAGTACGGTCAGTCAATGTAAATTGC
TAAGTGCACACAGAAAATGGTTTAGGTTAAGGCTAACCGTTAGATTGATTTTAGTGGGTCTAATCGTGCGGTGGTATTGGATCTGTGTACGCTTTGTGGG
GTGTGCTTAAAGAAGTTCTTGTTTGATTGTTTAATAGTAGTATAGAAGTATAGATTAATATGTAATGCACGTGCATCCACTGAACAGACACTTTGTCGGC
GTGGGTGCTGCGAACGGAGCTGAAGTCAATGCGGATGCCGATGGTTGCCGGAGAGCATGCCCTAGACGTGGATGGAGTCGTCGCAGTAGCGGCAGAAGAG
CGCCTGGCCTCCAGGTAGAAGACGATGGCGGCGATAGCACGCGTGTTCCCGAAGGAAGACGAAGCTCCTCGCGCTTCCCCCATCGTGTCTAGCATGCATG
ATGGCGGTAGGCGGTTCGCGATTAGCTTCCTAATAAGATGGATGCGTCCGAGATAAGTTTTTTAATAGGATGGATTTGTCTGAGATTAGTTTCCTAATAG
GATGGATGCACTCTGATTTAGTTTTTTAGAATAGGATGCACCTGTGATTATTAGTTTCCTAATTGCTCAGGCGTGGAGTTTCATATTTTCCTCCACGGTG