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Detailed information on CNT30283642


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30523685Triticum aestivumSetaria italica10.1821.6788.4678reverse complement
CNT30656284Triticum aestivumTriticum dicoccoides93.3485.4299.58715forward

Expression of CNT30283642

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MESHDLHTDDARGNKLDSQLWFSGIFTNKYYPANHGL*

>peptide 2 (40 aa)
MLTTADCCRESGSTGDRRNGSVARSVLKNIVRWPWWKNTT*

>peptide 3 (33 aa)
AAHDMKILAYTVPNISFKIAGVEFSPILLYGKP*

>peptide 4 (35 aa)
MDFRSRPQASRSTNDSLKVIQQSKVMSTQLAGQYQ*

>peptide 5 (32 aa)
MIFRERACVLYFYVHEVFCLGQAQIMKIKHYL*

Sequence

>CNT30283642
GCTGCACATGATATGAAGATATTGGCATATACAGTCCCAAACATAAGTTTCAAAATAGCAGGTGTGGAGTTTAGCCCTATTCTGCTGTATGGAAAGCCAT
GACCTCCACACAGATGATGCAAGAGGAAACAAGCTAGACTCACAACTTTGGTTTTCAGGCATCTTCACCAACAAATATTACCCTGCAAATCATGGACTTT
AGATCCCGACCGCAGGCCTCACGGAGCACCAACGATAGCCTCAAGGTGATTCAGCAGAGCAAGGTGATGAGTACTCAGCTGGCTGGTCAATATCAATGAT
CTTATCGGCCGGCAAAGCGGAGACGGACGACCACGGTCCCGACCTTGCCAGCAGGTGGAGACAATAAATGGGATCAAGGGAAGTTGGTCGGGCTCCAGCG
GCACATGCTTACCACTGCTGACTGTTGCCGGGAAAGCGGTTCAACCGGTGACAGACGCAACGGTTCAGTTGCCCGTTCGGTTTTAAAAAATATAGTCCGA
TGGCCATGGTGGAAGAACACGACATGAAGGACGAGGAGACATGAGCATCCGGTGGCAGTGCTTCGCACTTTGAGCAGTAGGGATACTTGATCATAGGGAA
AGGGAAGGGAGATGAGTTCGTGCTTGCATGATTTTTAGGGAAAGAGCGTGTGTATTGTACTTCTATGTGCATGAAGTGTTTTGTTTGGGCCAAGCCCAAA
TAATGAAAATAAAACACTATCTCTAAAACTATTCAAATCCTTTTGCATTTATTATCTTCTGCAAAT