Detailed information on CNT30283592


BLAST search results

BLAST vs Swiss-Prot:
sp|P11095|PSBC_HORVU, E-value = 0.0

BLAST vs NONCODE:
NONVVIT000784, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30367840Triticum aestivumSorghum bicolor10.9471.0597.18319forward

Expression of CNT30283592

Peptides detected in this lncRNA

>peptide 1 (57 aa)
MIVLSSVDDFFLVQCPFSMVSKREISHFYLWSHNRGRGKSMNLIRFVFLILFVFLIL*

>peptide 2 (56 aa)
MKIKVTLLFPFPLYCMGGRTKIEDSEKKGPSKSNFMCSAKELRFLLIPIEHLVTRI*

>peptide 3 (52 aa)
MSFFNLLKSKPLGPLRGSNHEARRSQKRIVSPPKITSPVGERIRYLPKPVGP*

>peptide 4 (52 aa)
MEKIPQESRVPEARDKCHRSLKLQRKLGEVRQIQSTEKYLELPPLALLPNLE*

>peptide 5 (52 aa)
MKWVQRPIMKSLKEKDESKYRCYAKTRRKEPTRLPQWINKEYRNKNSNWTRE*

Sequence

>CNT30283592
TCCTAGAACAAAATGAGAAGTTGATAACCAACTTCTAGGAGAGACATAATTAACTGCATTGATCTCGGTAGCTACGCCACCCACGGAATTTAAAGAGCCT
AAAGGAGCGTGGGTCATATATTCTGCTGAGCGTCGTTCTTGCCAAGGTTGTATGTCTTTTTTCAACCTACTCAAGTCCAAACCGTTGGGGCCCCTTAGAG
GTTCTAACCATGAAGCACGAAGGTCCCAAAAACGCATAGTTTCCCCTCCAAAGATAACCTCCCCAGTTGGGGAACGCATTAGATATTTACCTAAACCTGT
GGGTCCTTGAGCGGATCCCACATTAGCTCCAAGACGCTGGTCTCTAACTAGAAAAGTAAATGCTTGAGCTTGAGAAGCTTCTGGCCCGGTGGGTCCATAA
AACTCACTCGGATAAGCTGTATTATTGAACCATACTAAACAACAAGTGATAAAACCAAAGACAGATAAAGCAGCTAAACTATAAGACAAGTAAGCTTCTC
CAGACCATACAAATGCACGGCGAGCCCATGCGAAGGGTTTGGTTAAAATATGCCAAATTCCGCCAAATACACAAATAAAACCCAACCATACATGCCCACC
AATTATATCTTCTAAATCATCTACACTAACAATCCACCCTTCTCCACCAAAAGGAGATTTTAGTAAATAACCAAATATAACACTGGGACTAAGGGTCAAA
TTGGTAATTTTTCTTACATCTCCCCCCCAGGGGCCCAGGTATCATATACACCGCCAAAATAAAGAGCCTTGAGTACTAGAAGAAAAGCACCTAGACCTAA
CAAAATTAAGTGAATACCCAAAATTGTAGTCATTTTATTTCTATCTTTCCAGACATAACCAAAGAATGGAAAAGATTCCTCAAGAGTCTCGGGTCCCAGA
AGCGCGTGATAAATGCCACCGAAGCCTAAAACTGCAGAGGAAATTAGGTGAAGTACGCCAGATACAAAGTACGGAAAAGTATCTAGAACTTCCCCCCCTG
GCCCTACTCCCCAACCTAGAGTAGCTAAGTGTGGAAGTAAAATCAACCCTTGTTCATACATGGGCTTTTCTGGTACGAAATGGGCCACTTCAAATAGGTT
CATTGCTCTGGCCCAGAATACGATTAATCCGGCATGGGCTACATGAGCTCCAAGTAGTTTACCGGACAAATTGATAAGTCTGGCATTCCCAGCCCACCAA
GCAAAGCCGGTGGTTTCTTGGTCACGACCAGCTAAAACGAAAGTTCCATTAAAGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGATTTTCA
TGAGGCTGATCCTGAGCTGCCATCCACGCACGAATACCCTCGTTTAAAAGAATATTTTTGGTGTAGAAAGTCTCAAATTCAGGATCTTCCGCTGCACGGA
TTTCCTGGGAAACAAAGTCATAGGCACGTAAGTTCAGAGCCAAGCCAACTACGCCAATAGCACTCATCCATAAACCGGTGACGGGTACAAATAGCATAAA
GAAATGTAACCAACGTTTATTGGAAAAAGCAACACCAAAGATTTGGGACCAAAAGCGGTTAGCAGTGACCATTGAATAAGTTTCTTCAGCTTGATTGGGT
TAAAAGCACGGAAGGTATTTGCACCATCACCGTCCTCAAATAGAGTGTTTTCTACGGTCGCTCCATGAATAGCGCATAGCAGAGCCGCACCTAATACTCC
GGCAACTCCCATCATATGAAATGGGTTCAACGTCCAATTATGAAATCCTTGAAAGAAAAGGATGAATCGAAATATCGCTGCTACGCCAAAACTCGGCGCA
AAGAACCAACCAGATTGCCCCAGTGGATAAATAAGGAATACAGAAACAAAAACAGCAATTGGACCAGAGAATGAGATTGCATTATAAGGCCGCAATTGAA
CAAACCGAGCAAGTTCAAATTGGCGTAACATGAAACCTATTAGTGCAAAAGCCCCGTGGAGAGCTACAAAAGTCCATAGACCGCCTAATTGACACCAACG
AGTAAAATCTCCTTGTGCTTCGGGCCCCCATAGTAGCAAAAAAGAGTGTGCTAAACTATTGGCAGGGGTAGAAACTGCTGCAGTTAAGAAATTACAACCT
TCCAAATAGGAACTAGCCAATCCATGGGTATACCAAGAAGTTACAAAAGTTGTCCCTGTAAACCAACCCCCTAAAGCGAAATAAGCACAAGGAAAGAGCA
ATAGGCCAGACCATCCTACAAAAACGAAACGGTCCCTTCGTAACCAGTCATCCATAGTATCAAATAGATCATTTTCTTCTTTAGGAATTCTACCAAGGGC
CATAGTCATAGTGATCCTCCTATTCAATTACTTCAACCATTTCCGAGCACCTCATATCACTTTCCAAGGCATATGATAGTTTTATCATCTGTGGACGATT
TCTTTCTCGTTCAATGCCCTTTTTCAATGGTCTCGAAGAGAGAAATTTCCCATTTTTATCTATGGAGTCACAACCGAGGTCGTGGTAAATCCATGAATTT
GATTCGATTTGTTTTTCTTATACTATTTGTTTTTCTTATACTATAGAAATAGAAATAATTTTTCTTTCTTTCTTATACTATAGAAAGAAATAAACCTTTG
AATTCAGCATTATTCCAAGACTCCTATTTCAAAGTCTATCTTTTAAGGGAAAAATGAAAATAAAAGTAACCCTTCTTTTCCCATTCCCTCTCTATTGCAT
GGGTGGAAGAACTAAAATAGAGGATTCTGAAAAAAAAGGACCTTCGAAATCCAATTTTATGTGTAGCGCAAAGGAGTTGCGATTTCTTCTTATTCCTATA
GAACATCTAGTAACAAGAATATGAAATCGTAAATAGCGAAAAATTCTTGTCTTGCGCGGTCTAAGTCTAAGGAAATAAAAAAAATTCGCTTATACAATTT
CATCTACATCGAATTTA