Detailed information on CNT30283591


BLAST search results

BLAST vs Swiss-Prot:
sp|Q0DG05|PSAH_ORYSJ, E-value = 4e-19

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693422Triticum aestivumOryza sativa53.4718.4883.21131forward
CNT30220389Triticum aestivumHordeum vulgare66.5337.388.34163forward
CNT30655703Triticum aestivumTriticum dicoccoides10068.25100245forward
CNT30679155Triticum aestivumTriticum urartu95.169.76100233forward

Expression of CNT30283591

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MGSSRTLSSSPRLVKGAAKVLKNLLCRPL*

Sequence

>CNT30283591
GGGCCATAGGGGGGAATCCATCAGATCCATGGTACACAAGCACGAGGCGAGAGGAGGAAGAAGGCCTTGATTGCAGATCTACTTAGATCTTGCCACGTGG
CCCCGGGGTGGGGGGCAGCTGGGGCCCCTTCTTGATGGGGAGCAGCAGGACCTTGAGCAGCAGCCCTCGCTTGGTGAAGGGCGCGGCGAAGGTGTTGAAG
AACTTGCTCTGCAGGCCGTTGTAGGGCGACGCCGCGTCGCTGCCG