Detailed information on CNT30283587


BLAST search results

BLAST vs Swiss-Prot:
sp|P33624|TBA2_ANEPH, E-value = 5e-116

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30504799Triticum aestivumNicotiana attenuata50.792.8487.05363forward
CNT30712730Triticum aestivumGlycine max71.79100.3983.46514forward
CNT3075301Triticum aestivumBrassica juncea25.8434.8487.57185forward
CNT30219368Triticum aestivumKalanchoe fedtschenkoi32.1239.3886.96230forward
CNT30208739Triticum aestivumHelianthus annuus28.6351.988.78205forward
CNT30720142Triticum aestivumTriticum spelta23.8847.7797.66171forward
CNT30570163Triticum aestivumVitis vinifera43.7237.888.18313forward

Expression of CNT30283587

Peptides detected in this lncRNA

>peptide 1 (42 aa)
TQQVVKQTPQSKDSNRQITDKATRADHGIAAARLAKAPGGRL*

>peptide 2 (52 aa)
MVATAALTSLGTTSPRYMRQQAMYLPWRGSHLAIIDEGSKALLAFSAEITGA*

>peptide 3 (56 aa)
MPSPTYQWTKARLAYMRSNLWSMREKTSTTLVELEIMHTALWTLARSPPGTTPGGW*

Sequence

>CNT30283587
CAACACAACAGGTTGTAAAACAAACACCACAAAGCAAAGATTCAAACAGACAGATAACAGATAAAGCCACTCGGGCAGATCATGGGATAGCAGCAGCACG
CCTTGCGAAAGCACCAGGAGGCAGGCTCTAGTACTCGTCGCCCTCGTCACCGTCCTCACCCTCGTCGAACTCAGCACCAACTTCTTCATAAGAACTCTCC
CTCCTCCATGCCCTCACCGACGTACCAGTGGACGAAGGCACGCTTGGCGTACATGAGGTCAAACTTGTGGTCAATGCGGGAGAAGACCTCGACGACACTG
GTGGAGTTGGAGATCATGCACACAGCCCTCTGGACCTTGGCAAGGTCACCACCTGGGACAACACCTGGTGGCTGGTAGTTGATACCACACTTGAAGCCAG
TGGGGCACCAGTCAACAAACTGGATAGTGCGCTTGGTCTTGATGGTGGCCACAGCAGCGTTGACATCCTTGGGAACAACATCACCACGGTACATGAGACA
GCAGGCCATGTACTTGCCGTGGCGGGGGTCACACTTGGCCATCATAGATGAAGGCTCAAAGGCGCTGTTGGCCTTCTCAGCTGAGATCACTGGGGCATAG
GAGGAAAGCATGAAGTGGATCCTCGGGTAGGGCACCAAGTTGGTCTGGAATTCATTGACATCAACATTCAGAGCACCATCAAACCTCAGGGAAGCTGTCA
GCGATGAAATGACCTG