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Detailed information on CNT30283510


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG86|RS271_HORVU, E-value = 7e-83

BLAST vs NONCODE:
NONSTUT000620, E-value = 1e-17

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30316655Triticum aestivumCorylus avellana31.4371.7593.81226forward
CNT30178120Triticum aestivumSecale cereale48.438.9392.24348forward
CNT30240506Triticum aestivumAvena sativa32.9630.7497.05237forward
CNT30655772Triticum aestivumTriticum dicoccoides46.7341.1899.7336forward
CNT3067544Triticum aestivumLeersia perrieri32.5514.2296.58234forward
CNT30369422Triticum aestivumOryza glumipatula32.8218.0495.76236forward
CNT30576569Triticum aestivumOryza barthii34.2120.3395.93246forward
CNT30499448Triticum aestivumDigitaria exilis32.1330.696.97231forward
CNT30116662Triticum aestivumOryza nivara34.2110.8995.93246forward

Expression of CNT30283510

Peptides detected in this lncRNA

>peptide 1 (71 aa)
MRRCWSGGIPSLSWILALTLSMVSEDSTSSVMVLPVRVFTKICILAKAGWSPPRAAAATAVAAAGLGLGWAA

Sequence

>CNT30283510
GCCGACATGAAATAGATTAACGTCATCAGAATGACCAAAATTTAAGCCCACATCGCATATCAGTAATATCCAGGAAAGATAACATAATACTCCAAGGTTT
CAGTTTTCAAAGACAAACGGGACACATATAAATGAGTTCAATTTGAAGAGCAATCGCAAGCCACCTCTAAGCCTTCTGGTTGTAGACGTAGGTGAGGCCG
CACTTGCCGCAGTAGTGGCGGTCAAAGTGGTTGGCCATGAAGGTCCCGGCGCCGCAATCGGCGTTGGGGCACTCCTTCCTGAGCCTGGTTACCTTGCCGG
TGGCGTCGTCGACCTTGTAGAACTGGAGGACGGCGAGCTTCACCTTCTTGTGCTTGTGCTTTTGCTTCTTGGGCTTGGTGTACGTCTTCTTCTTGCGCTT
CTTGGCGCCACCGCGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCG
AAGATGAGACGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGG
TCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATCTTGGCGAAGGCGGGGTGGTCGCCTCCGCGCGCTGCGGCGGCGACGGCAGTGGCGGCGGCGGGGTT
GGGTTTGGGCTGGGCGGCG