Detailed information on CNT30283310


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SZL8|FRS5_ARATH, E-value = 9e-32

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30383022Triticum aestivumTriticum turgidum9997.291002266forward
CNT30438033Triticum aestivumAegilops tauschii42.16100.2193.78965forward
CNT30655853Triticum aestivumTriticum dicoccoides24.4699.4798.75560forward
CNT30102269Triticum aestivumOryza rufipogon15.7324.1679.72360forward

Expression of CNT30283310

Peptides detected in this lncRNA

>peptide 1 (63 aa)
MESGRDCGNRSRRCTDEQPTMTTTNSRLSNKESIARAIIVRMCLVQPKVTGLVMESGSGGITA*

>peptide 2 (57 aa)
MGFAWSYEFMIVSILKAAYNILSITTYFDGHLCHTPNSCICSLPLALFLALVLETCL*

>peptide 3 (52 aa)
MGSVAASSARLRRAAPRPAVDLAGSKTGPSRLVSLASGTPKASPRLWLTRSL*

>peptide 4 (61 aa)
MVISAIHPTLVSARFRWHCSLLLSLKPAFEHINFFVRITFVEDLSCQNFRTLKPTCPAYAL*

>peptide 5 (29 aa)
MLIHREDNFLSILIYSPLIRGQQQWNRLV*

>peptide 6 (32 aa)
MLKNTVDVDPQRGQFPINLDLFSFDPGATTME*

>peptide 7 (39 aa)
MRAGNPAGEPDPQKLHQHPWSPEGIAATDQDDARTNNQP*

>peptide 8 (51 aa)
MHYKTHMLYHHSQIPFLSLVLTFCCNRDQCFDLPLPHLWCHDLHNIKNIIY*

>peptide 9 (33 aa)
ATHSTVREDSDREIHRSGPSPAARQELYSAVRL*

>peptide 10 (34 aa)
MPKFPDTETNMSCICIIKLICYIIILKFHSYLWF*

Sequence

>CNT30283310
AGCCACTCATTCCACTGTGAGGGAGGATTCCGACCGAGAAATCCACCGTTCAGGTCCGTCGCCGGCGGCAAGACAGGAGCTGTATAGCGCCGTCCGTCTC
TGATGCGCTTCGCCGCCCGGAGCTGTCACGGCTAGCGCCACCCGTCTCCGGCGCGATTCGCCGCCAGGAGCCACGGGGTTCGAAGGCAGTAAGACAGGAA
TCGCCGTCGCTCACCTCCGGCATGCTGCGCGGCCTGGAGCCGTTGTCTTGGCTGGAGGCAAGATGGGATCCGTCGCGGCTAGCTCTGCTCGCCTAAGGCG
CGCTGCGCCACGCCCGGCCGTGGACTTGGCCGGCAGCAAAACGGGGCCGTCGCGGCTAGTGTCGCTCGCCTCCGGCACACCCAAGGCCAGCCCAAGGTTG
TGGCTGACCCGCTCCCTGTGAGGTGGTGGCACGGTGGAACTGCAGCGCGTGCAGCCGGTGGCTGAGATTCCGCGGGAGGTCGCGCCGTCACAGTGGAAGA
TGCGAACTCGATGCAAACTCAACAAGCAAAGGTATTGAAGAATGGCACCTGTGTCTCCTTCTTGGATTGACTGCATCCGCTTTGATCGGAGATAATTTTT
ATAATCCTTTTGACCAAAGCTAAGACATCGCCTACCCCCTGCTTGTCTACTCATCACTTCATGACCAGATTTTGGTCTAATACCTGAATCATTCAATATG
TCAATCTGGGCCTTCTGAGCTTCTTTAATTCTTCTTTGGGATCGCAGTAGATGGGCTTTGCTTGGAGTTACGAGTTCATGATTGTGAGCATCCTCAAAGC
TGCTTACAACATACTTTCCATTACCACTTATTTTGATGGTCATCTCTGCCATACACCCAACTCTTGTATCTGCTCGCTTCCGCTGGCATTGTTCCTTGCT
CTTGTCCTTGAAACCTGCCTTTGAGCATATAAATTTCTTTGTTCGAATAACATTCGTTGAGGATTTATCATGCCAAAATTTCCGGACACTGAAACCAACA
TGTCCTGCATATGCATTATAAAACTCATATGCTATATCATCATTCTCAAATTCCATTCCTATCTCTGGTTTTAACCTTTTGCTGTAATCGTGATCAGTGT
TTTGACCTGCCTCTCCCACATCTGTGGTGTCATGATCTACACAACATAAAAAATATCATATACTAATTAGTTCACGGACGACGCATGGAGTAAAAGATAA
CACGATATTCAGTCCTAGTTTTAGTGAAACCTGAAAAGCCCTTATAGATAGAACAATGCTTTTTGGAAAACGACACATGGTATTCACGGGAGCGTTAGAA
ACATATTGATCTTTTTCTTTGATACAGTAATCTATATCATTAGAGTCAGCAAAAAGAGAATATGTCAAAGGAGAAATCTCAGGCAGTAAAATTTACGCAA
CATCGTAGGAGTAATCATCACTAACAGAATTATAATGCAATTCGAAGGATTAATTTGCATGTGTTTCAAAGAAACAGGGCTACGAAAGATGAAGTACTGG
GAGTAATTTGCATGTCATACATTCAACTCTTTGTTTATTTGTTTCTTTCAATCTTATCAGCTTCGTATGATCAAGTGTGTTGACAATTTGTACATTATAG
GCGCAAGAACATACCTACGGACGATGAAGTGGCAGGAGCTCCGTCCATGCTGAAGAACACCGTAGATGTTGATCCACAGAGAGGACAATTTCCTATCAAT
CTTGATCTATTCTCCTTTGATCCGGGGGCAACAACAATGGAATAGATTGGTATGAGAAAGGATGGATGAAGTCACGAAGAGATTTTGGCGGCAATCTGGT
GTTAGGCGGGAGATAAACCTGTCGTTTTGCTGATTTTTTAGAGCTAACTGCAATTAGAGAGATACGCTGGGTTGTTTAAGTGGTGGGGTCCTACCAGGAC
AGGTGTCGGCCACCCGTTGGCCCTGCACCATAATGCGTGCTGGGAACCCTGCAGGAGAGCCCGACCCACAAAAATTACACCAACATCCATGGAGTCCGGA
AGGGATTGCGGCAACAGATCAAGACGATGCACGGACGAACAACCAACCATGACCACTACAAATAGCCGTCTGTCCAACAAGGAGAGCATAGCTCGGGCGA
TTATTGTTAGGATGTGTTTGGTACAACCAAAGGTAACGGGACTGGTAATGGAATCAGGTAGCGGTGGGATCACAGCGTAATAGGAGGATTTGCTTTTCTG
TTTGTTTCATGCATGTAAAGGTATCAAGTTACAGAGCTAACAAGATCTGCTGTGTAATCAGATTGCAAAAAAACAAAAAAATCTCACAG