Detailed information on CNT30283261


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30383312Triticum aestivumTriticum turgidum97.1399.771001285forward
CNT30443351Triticum aestivumAegilops tauschii36.58100.8386.57484forward
CNT30719766Triticum aestivumTriticum spelta90.5598.121001198forward

Expression of CNT30283261

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MGSVAASSARLRRAAPRPAVDLAGSKTGPSRLVSLASGTPKASPRLWLTRSL*

>peptide 2 (43 aa)
RTAAATPSSTATHSTVREDSDREIHRSGPSPAARQELYSAVRL*

>peptide 3 (63 aa)
MESGRDCGNRSRRCTDEQPTMTTTNSRLSNKESIARAIIVRMCLVQPKVTGLVMESGSGGITA*

>peptide 4 (58 aa)
MRTRCKLNKQRRKNIPTDDEVAGAPSMLKNTVDVDPQRGQFPINLDLFSFDPGATTME*

>peptide 5 (29 aa)
MLIHREDNFLSILIYSPLIRGQQQWNRLV*

>peptide 6 (37 aa)
YRCCHSLFHSHSFHCEGGFRPRNPPFRSVAGGKTGAV*

>peptide 7 (39 aa)
MRAGNPAGEPDPQKLHQHPWSPEGIAATDQDDARTNNQP*

>peptide 8 (42 aa)
MHVKVSSYRANKICCVIRLQKNKKISQNRSQEQANMILTTIN*

Sequence

>CNT30283261
CGTACCGCTGCTGCCACTCCCTCTTCCACAGCCACTCATTCCACTGTGAGGGAGGATTCCGACCGAGAAATCCACCGTTCAGGTCCGTCGCCGGCGGCAA
GACAGGAGCTGTATAGCGCCGTCCGTCTCTGATGCGCTTCGCCGCCCGGAGCTGTCACGGCTAGCGCCACCCGTCTCCGGCGCGATTCGCCGCCAGGAGC
CACGGGGTTCGAAGGCAGTAAGACAGGAATCGCCGTCGCTCACCTCCGGCATGCTGCGCGGCCTGGAGCCGTTGTCTTGGCTGGAGGCAAGATGGGATCC
GTCGCGGCTAGCTCTGCTCGCCTAAGGCGCGCTGCGCCACGCCCGGCCGTGGACTTGGCCGGCAGCAAAACGGGGCCGTCGCGGCTAGTGTCGCTCGCCT
CCGGCACACCCAAGGCCAGCCCAAGGTTGTGGCTGACCCGCTCCCTGTGAGGTGGTGGCACGGTGGAACTGCAGCGCGTGCAGCCGGTGGCTGAGATTCC
GCGGGAGGTCGCGCCGTCACAGTGGAAGATGCGAACTCGATGCAAACTCAACAAGCAAAGGCGCAAGAACATACCTACGGACGATGAAGTGGCAGGAGCT
CCGTCCATGCTGAAGAACACCGTAGATGTTGATCCACAGAGAGGACAATTTCCTATCAATCTTGATCTATTCTCCTTTGATCCGGGGGCAACAACAATGG
AATAGATTGGTATGAGAAAGGATGGATGAAGTCACGAAGAGATTTTGGCGGCAATCTGGTGTTAGGCGGGAGATAAACCTGTCGTTTTGCTGATTTTTTA
GAGCTAACTGCAATTAGAGAGATACGCTGGGTTGTTTAAGTGGTGGGGTCCTACCAGGACAGGTGTCGGCCACCCGTTGGCCCTGCACCATAATGCGTGC
TGGGAACCCTGCAGGAGAGCCCGACCCACAAAAATTACACCAACATCCATGGAGTCCGGAAGGGATTGCGGCAACAGATCAAGACGATGCACGGACGAAC
AACCAACCATGACCACTACAAATAGCCGTCTGTCCAACAAGGAGAGCATAGCTCGGGCGATTATTGTTAGGATGTGTTTGGTACAACCAAAGGTAACGGG
ACTGGTAATGGAATCAGGTAGCGGTGGGATCACAGCGTAATAGGAGGATTTGCTTTTCTGTTTGTTTCATGCATGTAAAGGTATCAAGTTACAGAGCTAA
CAAGATCTGCTGTGTAATCAGATTGCAAAAAAACAAAAAAATCTCACAGAATCGAAGCCAAGAACAAGCTAACATGATCTTGACGACAATTAACTAGAGC
AATAAACAAATCATGGAGAGGGA