Detailed information on CNT30283203


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT000710, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30519021Chenopodium quinoaJuglans regia100.5272.493.931532forward
CNT3091928Chenopodium quinoaSolanum tuberosum50.5999.8795.46771reverse complement
CNT3036642Chenopodium quinoaCucumis melo58.6699.2292.84894forward

Expression of CNT30283203

Peptides detected in this lncRNA

>peptide 1 (39 aa)
RAGRRVPAGGRTGNGPFGGLPRASNSQLRTGTDKGNPTV*

>peptide 2 (55 aa)
MPRHLISDAHEWINEIPTVPVYYPAKPQPRERAWQNQRGKKTLLSLTLVRLCEMT*

>peptide 3 (44 aa)
MRPPPDCRPTVGASAPKGMCRRLSSRGGCAVRAALKYNSYRAAG*

>peptide 4 (40 aa)
MPLLLDLRSALRADPGGGHCQVGSLAGAAHLLKDNAGVLR*

>peptide 5 (34 aa)
MNGLTRFPLSLSTIQRNHSQGNGLGRISGERRPC*

>peptide 6 (35 aa)
MVIQPSTRGTVDSHNWSSRLVEKPVARSYRVLDYD*

>peptide 7 (51 aa)
SGSPRAGRGTDWERSLRGPSPGVEQSTQNWYGQGESDCLIKTKHCDGPCGC*

>peptide 8 (40 aa)
ERVAACRPGDGLGTVPSGAFPGRRTVNSELVRTRGIRLFN*

Sequence

>CNT30283203
AGAGCGGGTCGCCGCGTGCCGGCCGGGGGACGGACTGGGAACGGTCCCTTCGGGGGCCTTCCCCGGGCGTCGAACAGTCAACTCAGAACTGGTACGGACA
AGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCCTGCGGATGTTAACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAA
GAAATTCAACCAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATTA
ACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCAGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGAC
TCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCTTCGGCGCAAGTGAAATACCACTACTTTTAACGTTATTTTACTTACTCCG
TGAGTCGGAAGCGGGGCAATGCCCCTCCTTTTAGACCTAAGGTCCGCTTTGCGGGCCGATCCGGGCGGAGGACATTGTCAGGTGGGGAAGGTGTAGGATA
AGTGGGAGCTTCGGCGCAAGTGAAATACCACTACTTTTAACGTTATTTTACTTACTCCGTGAGTCGGAAGCGGGGCAATGCCCCTCCTTTTAGACCTAAG
GTCCGCTTTGCGGGCCGATCCGGGCGGAGGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGA
GCTCAACGAGAACAGAAATCTCGTGTGGAACAGAAGGGTAAAAGCTCGTTTGATTCTGATTTTCAGTACGAATACGAACCGTGAAAGCGTGGCCTAACGA
TCCTTTAGACCTTTTGAATTTAAAGCTAGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTT
GATCCTTCGATGTCGGCTCTTCCTATCATTGTGAAGCAGAATTCACCAAGTGTTGGATTGTTCACCCACCAATAGGGAACGTGAGCTGGGTTTAGACCGT
CGTGAGACAGGTTAGTTTTACCCTACTGATGACAGTGTCGCAATGGTAATTCAACCTAGTACGAGAGGAACCGTTGATTCACACAATTGGTCATCGCGCT
TGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGTGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCCAGAAGCGACGCATGCGCCCGCCGCC
CGATTGCCGTCCTACAGTAGGGGCTTCGGCCCCCAAGGGCATGTGTCGTAGGCTAAGCTCGCGCGGCGGATGCGCCGTGAGAGCCGCCTTGAAGTACAAT
TCCTACCGAGCGGCGGGTTGAATCCTTTGCAGACGACTTAAATACGCGACGGGGTATTGTAAGTGGCAGAGTGGCCTTGCTGCCACGATCCACTGAGATT
CAGCCCTATGTCGCTTCGATTCGT