Detailed information on CNT30283174


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30619309Chenopodium quinoaSesamum indicum68.7480.6694.361772reverse complement

Expression of CNT30283174

Peptides detected in this lncRNA

>peptide 1 (98 aa)
MEQCRQGKSAKWIRNFGKRIGSEGWARGSQSRTRRLSADCSSCFRGESGSPRAGRGTDWERSLRGPSPGVEQSTQNWYGQGESDCLIKTKHCDGPCGC*

>peptide 2 (34 aa)
MNGLTRFPLSLSTIQRNHSQGNGLGRISGERRPC*

>peptide 3 (40 aa)
MNRKPGYGAQLRANLDPTKGVGRLRQQDGGHGSRNPLRSV*

>peptide 4 (55 aa)
MPRHLISDAHEWINEIPTVPVYYPAKPQPRERAWQNQRGKKTLLSLTLVRLCEMT*

>peptide 5 (30 aa)
PKDGELCLSGRSQRKLWWRPEAILTCKSFV*

>peptide 6 (40 aa)
MPLLLDLRSALRADPGGGHCQVGSLAGAAHLLKDNAGVLR*

>peptide 7 (35 aa)
MVIQPSTRGTVDSHNWSSRLVEKPVARSYRVLDYD*

Sequence

>CNT30283174
CCCGAAAGATGGTGAACTATGCCTGAGCGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGAAGCGATACTGACGTGCAAATCGTTCGTCTGACTTGGG
TATAGGGGCGAAAGACTAATCGAACCGTCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGGAGCTCATTCGCGAGTTCTATCAGGTAAAGC
CAATGATTAGAGGCCTCGGGGGCGCAACGCCCTCGACCTATTCTCAAACTTTAAATAGGTAGGACGGCGCGGCTGCTTTGTTGAGCCGTGCCATGGAATC
GAGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCCGGGTTACGGTGCCCAACTACGCGCTAACCTAGATCCCA
CAAAGGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCG
AAAATGGATGGCGCTGAAGCGCGTGACCTATACCCGGCCGTCGGGGCAAGTGCCAGGCCCCGATGAGTAGGAGGGCGCAGCGGTCGCTGCAAAACCTGTG
GCGTGAGCCAGGGCGGAGCGGCCGTTGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGT
GAACGGCACTTGCACATGGGTTAGTCGATCCTAAGAGACGGGGGAAGCCTGTCCGATAGCGCGTTTCGCGCGAGCTTCGAAAGGGAATCGGGTTAAAATT
CCTGAACCGGGACGTGGCGGTTGACGGCAACGTTAGGAAGTCCGGAGACGTCGGCGGGGGCCTCGGGAAGAGTTATCTTTTCTGTTTAACAGCCTGCCCA
CCCTGGAATCGGCTCAGCCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACGTTTTGTGGTGTCCGGTGCGCCCCCGGCGGCCCTTGAAAATCCGGA
GGACCGAGTGCCGACCACGCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTGGTCGATGGAACAATGTAGGCAAGGGAAGTCGG
CAAAATGGATCCGTAACTTCGGGAAAAGGATTGGCTCTGAGGGCTGGGCACGGGGGTCCCAGTCCCGAACCCGTCGGCTGTCGGCGGACTGCTCGAGCTG
CTTCCGTGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGGACGGACTGGGAACGGTCCCTTCGGGGGCCTTCCCCGGGCGTCGAACAGTCAACTCAGAAC
TGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCCTGCGGATGTTAACGCAATGTGATTTCTGCCCAGTGCTCTGAAT
GTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCA
TGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCAGAATCAGCGGGGAAAGAAGACCCTG
TTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCTTCGGCGCAAGTGAAATACCACTACTTTTAACGTTATTT
TACTTACTCCGTGAGTCGGAAGCGGGGCAATGCCCCTCCTTTTAGACCTAAGGTCCGCTTTGCGGGCCGATCCGGGCGGAGGACATTGTCAGGTGGGGAG
TTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTGGAACAGAAGGGTAAAAGCTCG
TTTGATTCTGATTTTCAGTACGAATACGAACCGTGAAAGCGTGGCCTAACGATCCTTTAGACCTTTTGAATTTAAAGCTAGAGGTGTCAGAAAAGTTACC
ACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATCATTGTGAAGCAGAATTCACCA
AGTGTTGGATTGTTCACCCACCAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTGATGACAGTGTCGCAATGGTA
ATTCAACCTAGTACGAGAGGAACCGTTGATTCACACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGTGCTGGATTATGACT
GAACGCCTCTAAGTCAGAATCCGGGCCAGAAGCGACGCATGCGCCCGCCGCCCGATTGCCGTCCTACAGTAGGGGCTTCGGCCCCAAGGGCATGTGTCGT
AGGCTAAGCTCGCGCGGCGGATGCGCCGTGAGAGCCGCCTTGAAGTACAATTCCTACCGAGCGGCGGGTTGAATCCTTTGCAGACGACTTAAATACGCGA
CGGGGTATTGTAAGTGGCAGAGTGGCCTTGCTGCCACGATCCACTGAGATTCAGCCCTATGTCGCTTCGATTCGTCCT